Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5244 |
Symbol | |
ID | 6412944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5655187 |
End bp | 5655720 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642715133 |
Product | hypothetical protein |
Protein accession | YP_001994206 |
Protein GI | 192293601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA TCTTCAAGGT GTATCAGGAC GCGGCCAAGG CGCAGGCGGC GGTGGCGGAG CTGAAGGCCG CTTCGTTCAG CAACGCCGCG ATCGTCTCCA GCGACAAGGA CGGTACCCTG GTCACGGTCG ACCCGCCGTT CGGCAAGGGT GGCCAGGCTG ACGCGATCCT CAACCGCCAC GGCGCGATCC GCGACGTCTC CGCCCGTCAT GGCAGCGGTG CCTCGCTGGC GGATTCCTCC ACCCGTCTGA CCGGCGCGCC GCGGCTGACC GACTCCCGCA CCACTCTGGG CTCGATCTTC CCGGAGCTGA CCAGCTCGAA CTTCTTCCTG TCGTCGATGT TCGGCCCGCT GCTGTCGGCG TCGCAGAAGC CGTGGTCCTC GCTCGCCGCA AGCCAGAAGC CGTGGTCCTC GCTGACCAAG AATCAGGATG CCTGGTCGTC GCTGGCCAGC AATCAGAAGG GTTCGGCCCA GCTGATCAAC AATCCGGCGC TGTTCTCGTC GATGCTCGGC CTGCCGGTGC TGGCCGGTCG TTAA
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Protein sequence | MTQIFKVYQD AAKAQAAVAE LKAASFSNAA IVSSDKDGTL VTVDPPFGKG GQADAILNRH GAIRDVSARH GSGASLADSS TRLTGAPRLT DSRTTLGSIF PELTSSNFFL SSMFGPLLSA SQKPWSSLAA SQKPWSSLTK NQDAWSSLAS NQKGSAQLIN NPALFSSMLG LPVLAGR
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