| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5222 |
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| Symbol | |
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| ID | 6412922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5634971 |
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| End bp | 5635351 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642715112 |
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| Product | Carboxymuconolactone decarboxylase |
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| Protein accession | YP_001994185 |
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| Protein GI | 192293580 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAAGA CGACGCACGA CAAGGGCTTG GAGATCCGCA AGGCGGTGCT GGGCGAAGCC
TATGTCGAGA ACGCGCTGAA GAACGCCGAC GACTTCAACC AGCCGTTCCA GGAACTCGTG
ACCGAGTACT GCTGGGGCGC GATCTGGGGG CGCGACGGGC TGCCGAAGAA GACCCGCAGC
ATGCTGCACC TGGCGATGAT CGCGATCCTC AACCGGCCGC ACGAGCTGCG CGCGCACATC
AAGGGCGCAC TCACCAACGG CGTCACCAAG GACGAAATCC GTGAGATCTT CATGCAGGTC
GCCTGCTACG CCGGCATCCC GGCAGGCGTC GACAGCTTCC GGATCGCCCG CGAAGTGTTC
GCAGAACTCG ACAAGGCTTG A
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| Protein sequence | MDKTTHDKGL EIRKAVLGEA YVENALKNAD DFNQPFQELV TEYCWGAIWG RDGLPKKTRS
MLHLAMIAIL NRPHELRAHI KGALTNGVTK DEIREIFMQV ACYAGIPAGV DSFRIAREVF
AELDKA
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