Gene Rpal_5205 details

Gene Information

• Locus tag: Rpal_5205
• Symbol: pyrE
• ID: 6412905
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 5615008
• End bp: 5615571
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642715095
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_001994168
• Protein GI: 192293563
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCAAAT CCGCGTCCCG CGCCCGCCTT GCCGACATCA TCCGCACCCG TTCGTTCGGC 
CGGGGAGAGA TCACGCTCGC GTCGGGTCGC AAAAGCGACT TCTATTTCAA CCTGAAGCCG 
ACGATGCTCG ATCCCGAGGG CGCGGCGCTG CTGGCGGAAT TGACCTACGA GACGCTGCGC 
GACGAGAAGG TCGATTATGT CGGCGGGCTG GAGATGGGCG CGGTGCCGCT GGCCGGCGCG 
ATCGCGCAGC TATCCTGGCT GAAGAACCAT CCGATTTCGG CATTCTTCGT GCGCAAGAAG 
CCGAAGGAGC ACGGCGCCCG GCTGTCGGTC GAAGGGTTGG CGAAGGGCGA GAGCCTGGCC 
GGCAAGCGCT GCGTCATCGT CGAGGACGTC ACCACCACCG GCGGCTCGGC CATCAAGGCG 
GTCGAAGCGG TGAAGGAATC CGGCGCCGAG ATCGTGCTGG TGCTGACCAT GGTGGACCGC 
GAAGAAGGCG CCACCGAAGC CTTCGCCGCA GCCGGCTTGC CGTTCCGGTC GCTGTACAAG 
GCCAGCGAGT TCCTCAACGT CTGA 

 

Protein sequence

MSKSASRARL ADIIRTRSFG RGEITLASGR KSDFYFNLKP TMLDPEGAAL LAELTYETLR 
DEKVDYVGGL EMGAVPLAGA IAQLSWLKNH PISAFFVRKK PKEHGARLSV EGLAKGESLA 
GKRCVIVEDV TTTGGSAIKA VEAVKESGAE IVLVLTMVDR EEGATEAFAA AGLPFRSLYK 
ASEFLNV