| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5202 |
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| Symbol | |
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| ID | 6412902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5603554 |
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| End bp | 5608542 |
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| Gene Length | 4989 bp |
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| Protein Length | 1662 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715092 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein |
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| Protein accession | YP_001994165 |
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| Protein GI | 192293560 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAA AATATCCTGG CATTCCCTCA GTGATCCACG GCAACGGCGC GGTGGCGCAG
GTGATGGGGC ATGTCTGCGG CGGCGTCATC GGCTACCCGA TCACGCCCTC GACCGAGATC
TCGGAAATCT ATGAGGCGTT CCGCTCGTCC GGCGGCTGCA ACGTCTGGGG CAAGCATCCG
TTCTTCTTCG AACCGGAAGG CGAGCACTCG GCGCAGTCCG GCGCGCTCGG CGCGGCGCTG
ACCGGCGGCA AGTTCATCTC CAACGCCTCC TCATCCCAGG GCATCCTGTA CGGCCTGGAA
TCGCACTACG TCACCGTCGG CAAGAAGGTC GGCGGCTTCG TGCTGCAGGT CGCCGCCCGC
GTGGTGTCGA AGCACTCGCT CAACGTGATG GCCGGCCATG ACGACGTCTA TGCGCTGCTG
TCGTCGGGCT ACACTATCCT GTTCGGCTCC AATCCGCAGG AAGCCGCCGA CCTCGCCGCG
ATCTCTTATA AAGTCGCCGC GATGTCGCTG ATCCCGGTCG CCAACGCGAT GGACGGCTTT
GCGACCTCGC ACATGCTGTC CGAAGCTCTG ATGCCGGAGC CGGATCTGCT GCGCGAATTC
CTCGGCGACC CGGCCGGCCG CATCCCGTGC CCGACCGTGG CGCAGGAAAT GCTGTTCGGC
GCCAAGGGCC GCGTGTTCCA GCTCAAGCAG TACCTGCTGC GGCACGAAGC CGACTTCATG
CCGACCGAGC TCGCGGCGCT CAAGAAGTTC CTCGACGACA ACGCCGACAC GATCGAGACC
GATAATGCCG GCACGATCGT CGCCGAGACC CAGCGCTGGG TGCCGGAAGA ACTGCGCGGC
CAGTGGAAGC GGCAGTGGAT CAACGCGCCC GAGAAGGGCA CCCGGCAGCT GGTGCCGGCG
CTGGTCGACA TCGACAATCC GGGCCTGACC GGCGGCGTGC AGAACCAGCC CGACTTCCAG
GCCGGCGCGG TCGACCACCG CACTCACTTC GCCAATGCGG TGCCGCACTT CGTCAAGGAA
GCGATGGCCG AATACGCCTC GCTCACCGGC CGTGAATACA AGCCGGTGAT GACCTACATG
TGCGACGACG CCGATCACGT CGTGGTCGGC CTCGGCTCGG TCACCGATGA TGCCGAAGCG
GTCGCGGCCT ACTTGCGCTC GCAGGGCAAG AAGGTCGGCG TGGTGTCGAT CAAGATGCTG
CAGCCGTTCC CGGAAGCCGA GCTGGTCGAA GCGCTGAAGG GCAAGACTGC CGTCACCGTG
CTGGAGCGTT CGGAAGTCAC CGCGCTGACC CAGCTCGTGA CCCAGGCGCT GTGCAAGGCG
CGCGAGAACG GCGACGCCGG CGTGCGTCAT GCCGGCATCC CGGCGCTGAC CAAGCTGCCG
AAGATCACCA CAGCGATCTT CGGTCTCGGC GGCCACGATC TGCAGCCGCG CGACCTGATC
GCCTGCTACG CCAACATGGA GAAGCAGGAC TCGGCGCCGT TCGTGTATCT CGGCACCAAG
TTCTTCACCG AGAACCCGTC GCCGCGCATG GAGGCGCTGC AGAGCCGGCT GAAGGCGGCC
TATCCGGAAA CGCAGTACAT GGCGCTGGAG ACCGGGACCA ACCCGAACCT GCTGCCGCCG
TCCGCCTTCC GCATCCGCTT CCACTCGATC GGCGGCTACG GCACCATCGC GTCGGGCAAG
CTGCTGACCG ACATCCTGGC CGGCGCGCTC GACATGCATT CGAAGTCGGC GCCGAAATAC
GGCTCGGAAA AGAGCGGCGC GCCGACCAAC TACTACATCA CGCTGTCGCC GGAGCCGGTG
AAGATCACCA ACGCCGAGCT GGAAGACGTC GAGATCGTGA TCTCGCCGGA CCACAAGGTG
TTCGTGCACA CCAACCCGCT GCGCGGCCTG GTCGCCGGTG GCACCTTCAT CCTGCAGACC
AACCTGTCGC CGCTCGAAGT CTGGCGTGAC ATGCCGGCCA AGGCCCGCCA GACCATCCGC
GACAAGAAGA TCAAGTTCTA CGTGATCGAC GCGTTTGCGG TGGCCAAGCG CCACGCGCCG
ACCGCCGAAC TCGAAACCCG CATGATGGGC ATCGCCTTCA TCGGCGCGGT GTGCGGCAAC
GTCGACCGCG TGGTCGCCGA CGCCTCGCAG GACGCGATGC TCAACAAGAT CCGCCAGCAG
ATCTCGAAGA AGTTCGGCGC CAAGGGCGGC GACATCGTCG AGGGCAACAT GGCGGTGATC
CGCGAGGGTC TCGAAGCCAC CCACAAGGTC GATTACGACG CCGCCGAGTT CAGCGAGGAC
GCCATCAAGG CTGCCCCGAA GGCCAAGCGC GACGCTTCGA TCTCGGCCTC GATGTGCCGC
GTCGCGGCGC CTGCGTCGGC TGCGGGCTTC CTCGATCCGG AGTACTACGA CGACGTGCTC
GCCGCGCCGT TCCGTGACGG CACCATCGCC GAAGCGCCGG TGCTGCCGGG CATCGGCATG
TTCATGCCGG CCGGCTCCGC CGCCGCCAAG GACAAGGGTC TGTTCCGCCG CAACGTGCCG
GAGTTCAAGG CCGACCTCTG CACCGGCTGT ATGGAATGCG CGCTGGTCTG CCCCGACGCT
GCGATCCCGA ACGCGGTGCA CGACATCCAC GAACTGCTGC TGACCGCCAT CAAGCAGCTC
GACATCGCGC CCGCTCAGCA AGACGCGCTG CGGGAGAAGG TGCCGGCGCT GACCGAAGCG
ATCCGCGACG TGTATCGCGG CGGCAAGGAC GACAAGCCGT TCAACGAGAT CGTGGCGCAG
GCCGCGGAGG CGCTGAACGT CGACAATGCC ACGCTGAACC GCAACTTCGG CAAGCTGTCG
GGGGCGCTGT CGGTGTATCC GGTGGCCCGC ACCCGGCCGT TCTTCGACGC GATGGAGAAG
AGCCAGCCGG GCACCGGCGG TCTGTACTCG GTCAGCGTCG ACCCGTGGAA GTGCTCGGGC
TGTCTCGAAT GTATCGACGT CTGCGGCCCC GGCGCGCTGG TCGATCGTGA GCAGGACGAG
CCGATGCTGG AGCAGCTCCA GGCGCGGTTC GAATTCCTCA GCCGCACCCC GAACACTCCG
GCGCGGTTCA CCGAAAGCGC GACCAAGCCG GAAGGCGAGA CCAAGCGGCT GATGCTCGAT
CGCGCCAATT ACTACGCCAC CACCGGCGGC CACGGCGCCT GCCGCGGCTG CGGTGAAGTC
ACCGCGATCC GTCTGGTCAC CTCGACCAAC CACGCGATCC ACGACAAGCG CCGCAAGGAC
CACATCCGCG AGCTGGAGAC CCTGATCGAC CAGCTCAATG CCAAGCGGGC GCTGGTGGCC
GGCGACGACG CCCGCGCCGC CCGGATCGAC CAGACCCTGA AGACGCTGGA GAAGCGGCTG
TATCTCTACG AGAGCGGCCC GACCGGCAAC GGCCCGTCCG GCATGGTGAT CGCCAACGCC
ACCGGCTGCT CGAGCGTCTA TGCGTCGACC TTCCCGTTCA ACCCCTACAC CGATCCGTGG
GTGAACAGCC TGTTCCAGGA CACCCCCGCG GTGGCCAAGG GCATCTTCGA AGGTCTCACC
GCCAAGGCGT CCGAGGACTT CCGCGCGCTG CGCATCGCCA AGCTCGAACT GGCCGACGCC
TATGATGCGG CCAAGCACGA CGGTTACTTC CGTTACTTCG GCTGGAGCGA ATTCACGCCC
GAAGAGCGGT CGATGCTGCC GACCGTGCTG AGCATGGGCG GCGACGGCGC CACCTACGAC
ATCGGCTTCG GCGCGCTGTC GCGTCTGCTC GCCACCAAGA CTCCGATCAA GGTGGTGGTG
CTGAACACCG GCGCCTACTC CAACACGGGC GGCCAGACCT CGACGGCGAG CCTCACCGGG
CAGGACAGCG ACCTGTCGCG GTTCGGCATC GCCCAGCACG GCAAGCAGGA ATCCCGCAAG
GAGCTCGGCC TGATCGCCTC GTTCCATCCC AACGTGTTCG TGGTGCAGAC CGCGACCGCG
CTGCAGGGCC ACTTCCTGAA GAACGTGATG GAGTTCCTGA ACCACACCTC GTCGCCGGCG
GTGCTCGACG TCTATACGCC GTGCCAAGCC GAACACGGCA TCGGCGACGC CGTCGCCAAC
CGCCAGGCGC GTCTGGCGGT CGAAAGCCGG ATGAATCCGG TGTTCGTCCA CGACCCGCGC
AAGGGCAGCA AGCTCAACAA CTGGTTCTCG CTCGACGGCA ACCCCGAGGC CGACCAGGAC
TGGGCGACCA AGACGATCGA GTACGTCGAC GCCGACGGCA AACCGCAGCT TCTCAAGGCC
AAGCTGACGC CGGCCGACTT CGCCCACACC GAAGTCCGCT TCCGCAAGCA GTTCAAGCCG
CTGAAGAAGG ACGAGGGCGC GCTGCCGATC GACGAATACG TCGCGCTCGA TCCGGCGGCC
CGCGCCGGCA AGACGCCGTT CATCTACGCC ACCGATGCCG ACAAGAAGCT GGTCAAGCTG
TCGGTCGGCG AAACCGTGGT GGCGCTGGTG GAAGAACGGC GGAAGTACTG GCGCACGCTG
CAATATCTCG GCGGCTTCGA CGTCCGGGCG CTCGACGAAG CGCACAGCGC CGAACTGGCC
GCGCTGCAGC ACCAGTACGA CGAACAGGTC AAGGCCCGCG AAAGCTCGCT CGATCAGATC
GCGCGCGGCA TGAGCGAGCT GGCGGCCTCC TCCAACGCGC CGGCGGCCGG TGGCTTCGGC
GCGCTGATGA ACGGCTTCGC GGCAGCTCCG GCGGCCGCGG CGCCGACCAA CGGTGCCAAG
ACCGCCAACG GCAACGGCGC CGAGCCGATC CACATCGACG ATGCGGATCT CGGCAAGTGC
ACCAACTGCA AGAGCTGCTA CCAGGACGTG CCGGAAGTGT TCGAACTCAC CAAGATCGTC
GTCGACGGCG CCCCGAAGGA CGTCGCCCAC GTCATCCCCG GCGTGTTCGG CAAGCTCAAG
GTGACGCCTG AACTGTCGGC CAAACTGAGC CGCGCGGCGG CCAACTGCGA TGCGGAGATC
ATTCGATGA
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| Protein sequence | MNAKYPGIPS VIHGNGAVAQ VMGHVCGGVI GYPITPSTEI SEIYEAFRSS GGCNVWGKHP
FFFEPEGEHS AQSGALGAAL TGGKFISNAS SSQGILYGLE SHYVTVGKKV GGFVLQVAAR
VVSKHSLNVM AGHDDVYALL SSGYTILFGS NPQEAADLAA ISYKVAAMSL IPVANAMDGF
ATSHMLSEAL MPEPDLLREF LGDPAGRIPC PTVAQEMLFG AKGRVFQLKQ YLLRHEADFM
PTELAALKKF LDDNADTIET DNAGTIVAET QRWVPEELRG QWKRQWINAP EKGTRQLVPA
LVDIDNPGLT GGVQNQPDFQ AGAVDHRTHF ANAVPHFVKE AMAEYASLTG REYKPVMTYM
CDDADHVVVG LGSVTDDAEA VAAYLRSQGK KVGVVSIKML QPFPEAELVE ALKGKTAVTV
LERSEVTALT QLVTQALCKA RENGDAGVRH AGIPALTKLP KITTAIFGLG GHDLQPRDLI
ACYANMEKQD SAPFVYLGTK FFTENPSPRM EALQSRLKAA YPETQYMALE TGTNPNLLPP
SAFRIRFHSI GGYGTIASGK LLTDILAGAL DMHSKSAPKY GSEKSGAPTN YYITLSPEPV
KITNAELEDV EIVISPDHKV FVHTNPLRGL VAGGTFILQT NLSPLEVWRD MPAKARQTIR
DKKIKFYVID AFAVAKRHAP TAELETRMMG IAFIGAVCGN VDRVVADASQ DAMLNKIRQQ
ISKKFGAKGG DIVEGNMAVI REGLEATHKV DYDAAEFSED AIKAAPKAKR DASISASMCR
VAAPASAAGF LDPEYYDDVL AAPFRDGTIA EAPVLPGIGM FMPAGSAAAK DKGLFRRNVP
EFKADLCTGC MECALVCPDA AIPNAVHDIH ELLLTAIKQL DIAPAQQDAL REKVPALTEA
IRDVYRGGKD DKPFNEIVAQ AAEALNVDNA TLNRNFGKLS GALSVYPVAR TRPFFDAMEK
SQPGTGGLYS VSVDPWKCSG CLECIDVCGP GALVDREQDE PMLEQLQARF EFLSRTPNTP
ARFTESATKP EGETKRLMLD RANYYATTGG HGACRGCGEV TAIRLVTSTN HAIHDKRRKD
HIRELETLID QLNAKRALVA GDDARAARID QTLKTLEKRL YLYESGPTGN GPSGMVIANA
TGCSSVYAST FPFNPYTDPW VNSLFQDTPA VAKGIFEGLT AKASEDFRAL RIAKLELADA
YDAAKHDGYF RYFGWSEFTP EERSMLPTVL SMGGDGATYD IGFGALSRLL ATKTPIKVVV
LNTGAYSNTG GQTSTASLTG QDSDLSRFGI AQHGKQESRK ELGLIASFHP NVFVVQTATA
LQGHFLKNVM EFLNHTSSPA VLDVYTPCQA EHGIGDAVAN RQARLAVESR MNPVFVHDPR
KGSKLNNWFS LDGNPEADQD WATKTIEYVD ADGKPQLLKA KLTPADFAHT EVRFRKQFKP
LKKDEGALPI DEYVALDPAA RAGKTPFIYA TDADKKLVKL SVGETVVALV EERRKYWRTL
QYLGGFDVRA LDEAHSAELA ALQHQYDEQV KARESSLDQI ARGMSELAAS SNAPAAGGFG
ALMNGFAAAP AAAAPTNGAK TANGNGAEPI HIDDADLGKC TNCKSCYQDV PEVFELTKIV
VDGAPKDVAH VIPGVFGKLK VTPELSAKLS RAAANCDAEI IR
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