Gene Rpal_5201 details

Gene Information

• Locus tag: Rpal_5201
• ID: 6412901
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 5602502
• End bp: 5603071
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642715091
• Product: hypothetical protein
• Protein accession: YP_001994164
• Protein GI: 192293559

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTCG ACTCGCAATG CGATCTGGCT GCGCTGGTCT ATGAGCGCGG CGAAGACCCC 
GACCGCGTGC TCGGCGAATT TGCTGCCGAT CTCAATTCAC AGGGATACCG TGCGGTCGGG 
CTGGTGCAGG TCGGGCCGCG CGGCGACGAG ACCCGCGGGC TGTCCGCGCG GCTGGTGCAT 
TCCGGCGAGC AGGTCTCGCT GTATCAGGAT CTCGGGCCGA TGGCCGAAGG CTGCCGGCTC 
GATCCGAGCC GCCTGCTCGA CGCCGGCGCG CGGGTTGCCT GCGCCCTGGC GCAGGGCGCC 
GACCTTCTGA TCATCAACCG GTTCGGTCAG CAGGAGAGCG AGGGCAAGGG CCTGCTGCAT 
CTGATCGTCG AGGCGCTCAG CGCCGACATT CCGCTCGTGA TCGCCGTGCC GAGCCATCGC 
TTCGACGCCT GGATCAAGTT CGCCGACGGC ATGAGCGTGC GGCTGAAGTG CGAACGGCGC 
GCGCTCGATC AATGGTGGGG CAAGCTGCAT GGTCGCAGCT TTCGCCGTCC CGCCCACCCT 
CACGTCAGCA TCTGCGAGGC GCTGAAGTAA 

 

Protein sequence

MTFDSQCDLA ALVYERGEDP DRVLGEFAAD LNSQGYRAVG LVQVGPRGDE TRGLSARLVH 
SGEQVSLYQD LGPMAEGCRL DPSRLLDAGA RVACALAQGA DLLIINRFGQ QESEGKGLLH 
LIVEALSADI PLVIAVPSHR FDAWIKFADG MSVRLKCERR ALDQWWGKLH GRSFRRPAHP 
HVSICEALK