Gene Rpal_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5197 
Symbol 
ID6412897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5599508 
End bp5600194 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID642715087 
Productmolybdate ABC transporter, inner membrane subunit 
Protein accessionYP_001994160 
Protein GI192293555 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATC TTCCCCCCGA TATCTGGCAG CCGGTGCGGC TGACCATCGA GCTGGCGGCG 
ATTACCACGT TGATCCTGCT GATCGTCGGC ACGCCGATCG CATGGTGGTT GGCGCGGTCG
AAAGCGTGGT GGAAGGAAGG GATTGCGGCG GTGGTGGCGC TGCCGCTGGT GCTGCCGCCG
ACCGTGCTCG GCTTTTATCT TCTGGTGCTG ATGGGCCCCG ACGGACCGGG CGGCGCGCTG
GCGTCGCTGT GGGGCGGCCG CACCGTGGCT TTCACTTTCG GCGGTCTGGT GTTCGGCTCG
GTGATCTATT CGATGCCTTT TGTTGTGCAG CCGATCCGCA ACGCGTTCGA CGCGATCGGC
GATCGTCCGC TCGAAGTCGC CGCGACGCTG CGCGCCTCGC CATTGAAGGC GTTCTGGACC
GTGGCGATGC CGCTGGCGCG GCCGGGCTTT CTGGCCGGCG CGGTGCTCGG CTTTGCCCAT
ACTGTCGGCG AATTCGGCAT CGTGCTGATG ATCGGCGGCA ATATTCCTGG CAGCACCAAG
GTGCTGTCGG TGGCGATCTA CGACTACGTC GAGACCTCGC AGTGGCGTGA AGCCAACATC
CTGGCCGGCG GCATGGCGGC GTTTGCCTTC GTGGTGATCC TGACGATGAT GATGCTGGAA
AAGCGAACCG CGCGGATCCG GACATGA
 
Protein sequence
MTNLPPDIWQ PVRLTIELAA ITTLILLIVG TPIAWWLARS KAWWKEGIAA VVALPLVLPP 
TVLGFYLLVL MGPDGPGGAL ASLWGGRTVA FTFGGLVFGS VIYSMPFVVQ PIRNAFDAIG
DRPLEVAATL RASPLKAFWT VAMPLARPGF LAGAVLGFAH TVGEFGIVLM IGGNIPGSTK
VLSVAIYDYV ETSQWREANI LAGGMAAFAF VVILTMMMLE KRTARIRT