| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5189 |
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| Symbol | |
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| ID | 6412889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5591465 |
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| End bp | 5592433 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715079 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001994152 |
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| Protein GI | 192293547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.75587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGC CTGCGTTGTT CAAGGGCCGC CTCTCGGTCC CGGTGATCGG CTCACCGTTG
TTCATTATTT CGGGTCCCGA GCTGGTGATC GCGCAATGCA AGGCCGGCGT GGTCGGGTCG
TTTCCGGCGC TCAATGCACG TCCCGCCGCG CTGCTCGACG AGTGGCTGCA CCAGATCAAG
GAAGAGCTCG CGGCCTACGA CAAGGCGCAT CCCGAGCGTC CGTCGGCGCC GTTCGCCGTC
AACCAGATCG TACACAAATC CAACAACCGG CTCGATGCCG ACCTCGCGCT TTGTGAAAAG
CACAAGGTCC CGATGCTGAT CACCTCGCTC GGCGCCCGTG AAGAGCTGAA CCAGGCCGCG
CATAATTGGG GCGGCATCGT CTTCCACGAC GTCATCAATC AGAAGTTCGC CCATAAGGCG
GTCGAGAAAG GCGCCGACGG CCTGATCCTG GTCGCGGCCG GCGCCGGCGG CCATGCCGGC
ACGCAGTCGC CGTTCGCCTT CGTCACCGAA ACCCGCGCCT GGTACAACGG CCCGATCGCT
CTGTCCGGCG CGATCGCCAA TGGTCGCGCG ATCCGCGCCG CCCGCGTGCT CGGCGCCGAC
TTCGCCTATA TCGGCTCGGC CTTCATCGCC ACTAAGGAAG CCAATGCGGT CGACCGCTAC
AAGGAGATGA TCACCACCTC CGGCGCCGAC GACATCGTTT ATTCCAACCT GTTCACCGGC
GTGCACGGCA ACTACCTCAA GCCGTCGATC GTCGCGGCCG GCATGGACCC GGACAATCTC
GAACAGTCCG ATCCGTCGAA GATGAACTTC GGCACCGACG AGTCCGGCGA GCGCGCCAAG
CCGAAGGCCT GGAAGGAGAT CTGGGGAGCG GGCCAGGGCA TCGGCAGCAT CGACGCAGTG
CTGCCGGCCG GCGAACTGAT CGCCCGCTTC AAGAAGGAAT ACGACGAGGC GATCGACCCG
CCGCTGTGA
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| Protein sequence | MPMPALFKGR LSVPVIGSPL FIISGPELVI AQCKAGVVGS FPALNARPAA LLDEWLHQIK
EELAAYDKAH PERPSAPFAV NQIVHKSNNR LDADLALCEK HKVPMLITSL GAREELNQAA
HNWGGIVFHD VINQKFAHKA VEKGADGLIL VAAGAGGHAG TQSPFAFVTE TRAWYNGPIA
LSGAIANGRA IRAARVLGAD FAYIGSAFIA TKEANAVDRY KEMITTSGAD DIVYSNLFTG
VHGNYLKPSI VAAGMDPDNL EQSDPSKMNF GTDESGERAK PKAWKEIWGA GQGIGSIDAV
LPAGELIARF KKEYDEAIDP PL
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