| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5186 |
|---|
| Symbol | |
|---|
| ID | 6412886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 5589517 |
|---|
| End bp | 5589912 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642715076 |
|---|
| Product | phosphoribosyl-ATP diphosphatase |
|---|
| Protein accession | YP_001994149 |
|---|
| Protein GI | 192293544 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT CGCTCGACCG CCTTTATCAG GCCGTGCTGG CGGCACGGGA TCTCGATCCG
GCGACGTCGC GCACCGCTCG GCTGTTTCAG CGCGGCTCCG GCAAGATGGC CAAGAAGCTT
GCCGAAGAGG CGATCGAAGT GGTGATCGAC GCGGTCAACG GTAACCGCGA GGCGGTGATC
CGCGAAAGCG CCGACCTTCT CTACAATCTG ACGGTGCTGT GGGCTTCGGC GGGCGTCCGC
CCTGAGGACG TCTGGGCCGA AATGCGCCGC CGCGAGAACC TGCTCGGCAT CGCCGAGAAG
CTGCCGAAAT CACGGATCGG CAAGCCGGCC GCGCCGCACG CGACGCGACG TCCCGTGATC
CCGCAGGACG CCCGCGCCGT GCGCAAGCAT CGCTGA
|
|---|
| Protein sequence | MADSLDRLYQ AVLAARDLDP ATSRTARLFQ RGSGKMAKKL AEEAIEVVID AVNGNREAVI
RESADLLYNL TVLWASAGVR PEDVWAEMRR RENLLGIAEK LPKSRIGKPA APHATRRPVI
PQDARAVRKH R
|
|---|
| |