| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5181 |
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| Symbol | |
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| ID | 6412881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5585596 |
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| End bp | 5586510 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715071 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_001994144 |
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| Protein GI | 192293539 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTCG AAAAGACCCC CGGCTGGCTG GACTGGTACC AAGGCCCATC GAAGCCCAAG
TTCAAGGTAC CGGCCGGCGC GGTCGATGCG CATTGCCATG TGTTCGGGCC GGGCGACGAG
TTTCCGTTCG CACTGGAGCG CAAGTACACG CCGTGCGATG CATCCAACGA ACAGCTCTAC
GCGCTGCGCG ACCATCTTGG CTTTTCCCGC AACGTCGTCG TCCAGGCGAC CTGCCACGGT
GCCGACAACC GGGCGATGGT TGATGCGCTG ATCAATTCGG GCGGCAAGGC TCGCGGCGTC
GCCACGGTGA AGCGCAGCGT CACCGATGCC GAACTGCAGG CGATGCACAA TGCCGGCGTC
CGCGGCGTGC GCTTCAACTT CGTCAAGCGG CTGGTCGACT TCACCCCGAA GGACGAGCTG
GTCGAGATCG CCGGGCGCAT CAAACAGCTC GGCTGGCATG TGGTGATCTA TTTCGAGGCG
GTCGACCTGC CCGAGCTGTG GGACTTCTTC ACCGCGCTGC CGACCACCGT GGTGGTCGAC
CACATGGGCC GGCCGGACGT CACCAAGCCG GTCGACGGCC CGGAGTTCGA GCTGTTCGTC
AAATTCATGC GCGAGCATGC CAATGTCTGG TCGAAGGTGA GCTGCCCCGA GCGGCTGTCG
GTGTCCGGCC CGCCGGCGCT GAACGGCGAG CAGAACGCCT ATCGCGACGT GATCCCGTTC
GCCCGCCGCA TCGTCGAGAC CTTCCCGGAC CGCGTGCTGT GGGGCACCGA CTGGCCGCAT
CCGAACCTGA AGGACCACAT GCCGGACGAC GGCCTGCTCG TCGACTTCAT CCCCCACATC
GCGACGACGC CGGAACTTCA GCGCAAGCTG CTGGTCGACA ACCCAATGCG GCTGTACTGG
CCGGAGGAGA AATGA
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| Protein sequence | MTFEKTPGWL DWYQGPSKPK FKVPAGAVDA HCHVFGPGDE FPFALERKYT PCDASNEQLY
ALRDHLGFSR NVVVQATCHG ADNRAMVDAL INSGGKARGV ATVKRSVTDA ELQAMHNAGV
RGVRFNFVKR LVDFTPKDEL VEIAGRIKQL GWHVVIYFEA VDLPELWDFF TALPTTVVVD
HMGRPDVTKP VDGPEFELFV KFMREHANVW SKVSCPERLS VSGPPALNGE QNAYRDVIPF
ARRIVETFPD RVLWGTDWPH PNLKDHMPDD GLLVDFIPHI ATTPELQRKL LVDNPMRLYW
PEEK
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