| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5175 |
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| Symbol | |
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| ID | 6412875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5579317 |
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| End bp | 5580315 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715065 |
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| Product | hypothetical protein |
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| Protein accession | YP_001994138 |
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| Protein GI | 192293533 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.573585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTGA TCCGACGCAT TGTTTTGTCT CGCCGGGCCG TCCTGACCAC AGCCGCCGCA
GCCTTGGCGG CGGCGAGAAT TCCGTCGTCC GCGCGAGCCC AGGGCCTGTA CCCGACCCGG
CCGGTGCGGA TCGTGCTGCC GTTCGCGGCC GGCGGTGTCG CCGACATCAC AGCGCGCCTG
ATCGCGGATC AGCTCGGCAC CAAGCTCGGC CAGCGCTTCT ATGTCGAGAA CCAGCCGGGC
GCTGGCGGCA TCGCCGCGGC GCGCACCGTG ATCTCATCAC CACCGGACGG CACGACGCTG
GCACTGTTGT CGAACGGCAC CGCGATCAGC GTGTCGCTGT TCAAGAAGCT GCCGTTCGAT
CCGGTGAAGG ATTTCGCGCC GATTTCCAGC CTCGGCACCT TCGACTTCCT GTTCGCCGTC
CGCGCCGAGT CCAAGTTCAA GACGCTGGAA GAGGTGATCA AGGCGGCGAA GCAGAAGCCG
GGCGCGCTCA ATGTCGGCAC CATCAACACC GGCAGCACGC AGAACCTCGC CGCGGCGTTG
TTCAAGACCG CAGCCGGCGT CGACTTCGTG ATCGTTCCGT TTCGCGGAAC GCCGGAGGTG
CTGGTGGCTC TGCTGCAGGA CAGCGTCGAC CTGACGATCG ACAGCTATTC GGCGCTGAAA
GGCAACCTCG CCGACGGCAA GATCCGGGCG CTGGCGGCGA CGGGGCCGCT GCGCTCGAAG
ATCACGCCCG AGATTCCTAC GCTGCGCGAG AGCGGCATCG AGGCCAGCAT CGAATCCTGG
AACGGATTGT TCGCGCCGGC CGGTACGCCG CCCGCGGTGA TCGGCGCGCT GAACACGGCG
CTGCAGGAGA TCCTCGCCGA TCCGGCACTC AAGAAGAAGA TGCTTGAACT CGGCATCGAC
GCCAGACCGT CGACACCGGA TCAATTGGCG GCACGGCTGC GCGCCGACAT CGAGAAATGG
CGCGCCGTGA TCGAGCAGTC CGGCATCGAG CGGCAATAG
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| Protein sequence | MSLIRRIVLS RRAVLTTAAA ALAAARIPSS ARAQGLYPTR PVRIVLPFAA GGVADITARL
IADQLGTKLG QRFYVENQPG AGGIAAARTV ISSPPDGTTL ALLSNGTAIS VSLFKKLPFD
PVKDFAPISS LGTFDFLFAV RAESKFKTLE EVIKAAKQKP GALNVGTINT GSTQNLAAAL
FKTAAGVDFV IVPFRGTPEV LVALLQDSVD LTIDSYSALK GNLADGKIRA LAATGPLRSK
ITPEIPTLRE SGIEASIESW NGLFAPAGTP PAVIGALNTA LQEILADPAL KKKMLELGID
ARPSTPDQLA ARLRADIEKW RAVIEQSGIE RQ
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