| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5161 |
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| Symbol | |
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| ID | 6412861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5560047 |
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| End bp | 5563199 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715051 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001994124 |
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| Protein GI | 192293519 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.938326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTCA ACGTTTCCTC CTGGTCGATC CGGCACCCGC TGCCCTCGAT CGTGTTCTCG
ATCATCCTCT TGGCACTGGG CTGGATCAGC TTCACCAAGC TGGCGGTCAC GCGACTGCCG
AGCGCCGACA TCCCGGTGAT CTCGGTCGCG GTGTCGCAAT TCGGCGCGGC GCCGGCCGAG
CTGGAAGCGC AGGTCACCAA GACCATTGAG GACGGCGTCT CCGGTGTCGA AGGCGTCCGC
CATATCGCCT CGTCGATCAC CGACGGCTTG TCGGTGACGA CAATCCAGTT CGCGCTGGAA
ACCAACACCG ACCGCGCGCT TAACGACGTC AAGGACGCGG TGACGCGGGT GCGCGCCAAC
CTGCCGCAGA ACATCAACGA GCCGCTGATC CAGCGCGTCG ACGTGATCGG CCTGCCGATC
GTCACCTATG CGGCGATCTC GCCCGGCAAG ACGCCGGAGC AACTTTCCTG GTTCGTCGAC
GACGTCGTCA AACGCGCGCT GCAGGGCGTG CGCGGCGTCG CCCAGGTCGA GCGCATCGGC
GGCGTCGAGC GCGAGATTCT GGTGTCGCTC GATCCCGATC GGCTGAAGGC CGCAGGGCTC
ACCGCGCTCG ACGTCTCGCG GCGGCTGCGT GGCACCAATG TCGATCTCGC CGGTGGCCGG
GCCGAAATCG GCAACAACGA TCAGGCGATC CGCACTCTCG CCGGCGCCCG GACGCTCAAC
GACCTCGCCG GCACCATGAT CAGCCTAAAT GCCGGCGGCG AGGTGCGGCT CGATGATCTC
GGCACCGTCA CCGACACCAT CGCGGCGCGC CACACCTTCG CGCGCTTCAA CGGCGAGCCG
GTCGTCGCGC TCGGCATCAA GCGCTCCAAG GGCGCCAGCG ACGTCGTGGT CGCCGAGGCG
GTGCAGAAAC GGATCGATGC GCTGAAGGCG CAATATCCCG ACGTCGAGCT GAAGCTGATC
GACACCTCGG TCGACTACAC CAAAGGCAAT TACGAGGCGG CGATCTCGAC CCTGTTCGAG
GGCGCGATCC TCGCCGTGAT CGTGGTGTTC CTGTTCCTGC GCGACTTCCG CGCCACCGTG
ATCGCCGCGA TCTCGCTGCC GCTGTCGATC TTCCCGGCGT TCTGGGCAAT GGACATGCTG
GGGTTTTCGC TGAACCTGGT CAGCTTCCTC GCCATCACAC TGTCGACCGG CATCCTGGTC
GATGACGCCA TCGTCGAGAT CGAGAACATC GTCCGCCACA TGCGGATGGG CAAATCGCCC
TATCAGGCGG CAATCGAGGC CGCCGACGAG ATCGGCCTCG CGGTGATCGC GATCTCGCTG
ACCATCATCG CGATCTTTGC ACCCGCCAGC TTCATGTCGG GCATCGCCGG GCAATTCTTC
AAGCAGTTCG GCATCACCGT CTCGGTGCAG GTGTTCTTCT CGCTGCTGGC GGCGCGGTTC
GTCACGCCGG TGCTGGCGGC GTACTTCCTG AAGGATCACC CGCACGTCGA GAAGCCGCCG
GGCCGCGTGT TGCGGGCCTA CACCCGCATC GTCACCTGGT CGGTGCAGCA TTATTACATC
ACGGTGCTGA TCGGGCTCGG CATCTTCGCC GCGTCGATCT GGAGCATCGT GCTGCTGCCC
CAGGGCTTCC TGCCGGCGCA GGACACCGCG CGCTCGGTGC TGGCGATGCA GCTGCCGCCC
GGCACCCAGA TCGGCACCAC CGAAAAAACC ACCGAGGCGA TCGTCAAGCT GCTGCGTGAG
CGGCCCGAGG TGAAAAGCGT ATTCGTCGAT GGCGGCCGGG TGCCGCCCGG CATCCAGGAA
GTGCGCCGCG CCTCGCTGAT CATCAACTAC ACGCCGAAGC ACGACCGCTC GATCACCCAG
CGCGAACTCG AGCACGTGAT CAGCAGGCAG CTCGATCAGG TGCCGGACAT CCGCTACTGG
TTCCTCGACG AGAACGGCCT GCGCGCGATC TCGCTGGTGG TGACCGGTGA CGACAGCGCC
GTGGTCAACA ACGTCGCCCA GGAACTCGCC TCGCAGATGA AGCGGATTCC GCTGATCTCC
AACGTTATCT CGGAGACCGC GCTGGACCGC CCCGAACTGC GGATCCGCCC GCGCGCCGAT
CTCGCCGCAC GACTTGGGGT CTCGACCGAG AGCCTGTCAG AGACGATCCG GGTTGCGACC
ATCGGCGACG TCGGCCCGGC GCTCGCGAAG TTCGATGCCG GCGACCGGCT GGTGCCGATC
CGGGTGCAGC TCGAAGACTC GGCGCGCGGC GAGCTCGCCA CGCTCGAACA GCTTCAGGTA
CCGATCTATG GCGGCCGCGG CGCGGTGCCG CTGTCGGTGG TCGCCGACGT CAAATTCGAT
CAGGGCCCGA CCAGCATCAA TCGCTACGAC CGGCTGCGCC AGGCCACCGT CGCGGCCGAC
CTCGTCGGCA ATTCCGCGCT GGGCGATGCC ACCAAGCAGA TCAACGACCT GCCAGTGATG
AAGTCGCTGC CGAAGGGCGT CAAAGTCAGC CCCTCGGGCG ATGCGGAGAA CCTCGCCGAG
CTGTCGGACG GCTTCGCCAC CGCGATCAGC GGCGGCCTGA TGATGGTATA TGCGGTGCTG
GTGCTGCTGT TCGGCACCTT CCTGCAGCCG ATCACCATCC TGTTCTCGCT GCCGCTGTCG
ATCGGCGGTG CGATCGGCGC GCTGCTGCTG ACCGGCAAGC AGCTCACCAC GCCGGTGTGG
ATCGGCATAT TGATGCTGAT GGGCATCGTC ACCAAGAATG CCATCATGCT GATCGAATTC
GCCATGGAGG CGATGCGCGA GGGCAAGAGC CGTGACGCGG CGATCATCGA CGCCGGCCAG
AAGCGCGCCC GTCCGATCGT GATGACCACG ATCGCGATGG TGGCCGGCAT GACGCCGAGC
GCGCTGGCAT TCGGCGCCGG CGGCGAATTC CGCTCGCCGA TGGCGCTGGC GGTGATTGGC
GGCCTGATCT TCTCCACGGT GCTGTCGCTG ATCTTCGTGC CCGCTGTGTT CATGATGATG
GATGACGTCG GCCGCGGCTT CTGGGCGGTC GGCAAGCGAC TGCTGAGCGG CAGCGCGCGC
GCCGCGACCG AAGCCGTGCC GGCGACGGCG ACGCCCTCGG CCAGCGCCGA GCCGGTGCCG
CCTGCCAAAA AACCGTCGTT CTGGCGCGGC TAG
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| Protein sequence | MGLNVSSWSI RHPLPSIVFS IILLALGWIS FTKLAVTRLP SADIPVISVA VSQFGAAPAE
LEAQVTKTIE DGVSGVEGVR HIASSITDGL SVTTIQFALE TNTDRALNDV KDAVTRVRAN
LPQNINEPLI QRVDVIGLPI VTYAAISPGK TPEQLSWFVD DVVKRALQGV RGVAQVERIG
GVEREILVSL DPDRLKAAGL TALDVSRRLR GTNVDLAGGR AEIGNNDQAI RTLAGARTLN
DLAGTMISLN AGGEVRLDDL GTVTDTIAAR HTFARFNGEP VVALGIKRSK GASDVVVAEA
VQKRIDALKA QYPDVELKLI DTSVDYTKGN YEAAISTLFE GAILAVIVVF LFLRDFRATV
IAAISLPLSI FPAFWAMDML GFSLNLVSFL AITLSTGILV DDAIVEIENI VRHMRMGKSP
YQAAIEAADE IGLAVIAISL TIIAIFAPAS FMSGIAGQFF KQFGITVSVQ VFFSLLAARF
VTPVLAAYFL KDHPHVEKPP GRVLRAYTRI VTWSVQHYYI TVLIGLGIFA ASIWSIVLLP
QGFLPAQDTA RSVLAMQLPP GTQIGTTEKT TEAIVKLLRE RPEVKSVFVD GGRVPPGIQE
VRRASLIINY TPKHDRSITQ RELEHVISRQ LDQVPDIRYW FLDENGLRAI SLVVTGDDSA
VVNNVAQELA SQMKRIPLIS NVISETALDR PELRIRPRAD LAARLGVSTE SLSETIRVAT
IGDVGPALAK FDAGDRLVPI RVQLEDSARG ELATLEQLQV PIYGGRGAVP LSVVADVKFD
QGPTSINRYD RLRQATVAAD LVGNSALGDA TKQINDLPVM KSLPKGVKVS PSGDAENLAE
LSDGFATAIS GGLMMVYAVL VLLFGTFLQP ITILFSLPLS IGGAIGALLL TGKQLTTPVW
IGILMLMGIV TKNAIMLIEF AMEAMREGKS RDAAIIDAGQ KRARPIVMTT IAMVAGMTPS
ALAFGAGGEF RSPMALAVIG GLIFSTVLSL IFVPAVFMMM DDVGRGFWAV GKRLLSGSAR
AATEAVPATA TPSASAEPVP PAKKPSFWRG
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