Gene Rpal_5159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5159 
Symbol 
ID6412859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp5558351 
End bp5559001 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID642715049 
ProductOmpA/MotB domain protein 
Protein accessionYP_001994122 
Protein GI192293517 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.314153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGGA TGTCCGCAGC CCGACACCGC GCCAAGGTCG GCGCACTCAT CCTGGCACTC 
GGCGCGGCAT TCCCGCTCGG CGACGCATCG GCCGGCGAGG TGACGTCGGA CCAGATCGTG 
CGGGCGCTGA CGCCGAACAA GCCGCTCACC CGCAGCCTGT CGGCGGCGCA GCCGGCCGCC 
GCGACGGGCG ATCCGACCCA GGCCAAGTTC GTCGACAGCC TGCGCAACCG TCCAACCCGG 
TCCCTGTCCT CCGGCGAGCG GACCCAGATC GCCGAGATCA CCAAGGACAA GCCGAACATC 
GATCTCGAAA TCACCTTCGA GTACAACTCC GCCAATATCA GCCGGCAGGC GGCAGCGGCC 
GTCGAAGCGC TTGGCAAGGC GCTGTCCAGT CCCGATCTGA AAGGCGGGAC CTTCGTGGTC 
GCCGGCCATA CCGACAGCGT CGGCAGCGAC AGCTTCAATC AGGACCTGTC GGAACGCCGC 
GCCGATACCA TCAAGCGCGT GCTGGTCGAG AAGTACGGCA TTGCGGGCGC CGACCTCGTC 
ACCGTCGGTT ATGGCGAGAG CCGGCTGAAA GATCCGGCGC ATCCCGATAG CGGCATCAAT 
CGCCGGGTGC AGGTGGTCAA CATGTCCGAC CAGAACGCCG CGGCCAAATG A
 
Protein sequence
MTWMSAARHR AKVGALILAL GAAFPLGDAS AGEVTSDQIV RALTPNKPLT RSLSAAQPAA 
ATGDPTQAKF VDSLRNRPTR SLSSGERTQI AEITKDKPNI DLEITFEYNS ANISRQAAAA 
VEALGKALSS PDLKGGTFVV AGHTDSVGSD SFNQDLSERR ADTIKRVLVE KYGIAGADLV 
TVGYGESRLK DPAHPDSGIN RRVQVVNMSD QNAAAK