| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5158 |
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| Symbol | |
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| ID | 6412858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5556822 |
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| End bp | 5558246 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715048 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_001994121 |
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| Protein GI | 192293516 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.927175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCC ATCTCGGCCT GGTTGTGCTT GTATTTGCCG CGATGATCGT GGCGCCGCGC
TCCTATGCGG CAGATAGTTC GGCGCCGCGG GTCGCGCTGG TGATCGGCAA CAGTAAATAT
CCGGATGCCG ACAAGCCGCT GAGTCAGTCG GTCAGTGATG CCCGCGAGCT CGCCGATGAC
CTGAAGCGCG CCGGCTTCGA TGCAGAGCTC GGCGAAGACC TGAGCGGCGA TGCGATGCGG
CGCGCGTTCG ACCGGCTGTA TCAGCGGACC AAGCCCGGCG CAGCCGCGCT GGTGTTCTTC
AGCGGCTTCG GCATCCAGTC GGGACGACAG AGCTATCTGA TCCCGATCGA TGCGCAGATC
TGGACAGAGC CTGACGTACG GCGCGACGGC ATCTCGCTCG AGACTGTTCT CAATGAGCTG
AATAGTCGCG GCGCATCGGT CAAGATCGCG CTGATCGACG CCTCCCGGCG CAATCCTTTC
GAGCGACGCT TCCGCAGTTT CTCCGCCGGC CTCGCACCGG TGATCGCGCC GAGCGGCTCG
CTGGTGATGT ATGCTGCTGC GCTGAGCGCC GTCGTCACCG ACAATGACAG CGCCCGTAGC
CCGTTCGTCA CGGCGTTGCG CGAGGAAATC CGCGCGGCCG GACGATCCGC CGAGGAGGCG
TTCAATCGCA CCCGGACCGC CGTCACCCGC GCCTCGCGCG GCGAGCAGGT GCCGTGGATC
TCGTCATCGC TCGCCGAGGA CTTTGTGTTC ACCCCCGGTG CCAAGGCAGA CAAGCCTGCC
GTCGCCGAGC CTGCGAAACA GCCCGCAGCC CCCGCCCCGG CGGAGAGCGC AAAACCACCG
ACGGCGCCGC CCGAAACCAA GCCGCCACAG GCCGCGGAAG CGAAGCCTTC CACCAGCCGT
GACGACGACA AACTGGTGCT GGCGCTCGCG AGCGATCCAA CGGTGAAATC GCTGACCGCT
CAGATTGCGG ACAAACCGTC CGACGGCAAT GCGTATTACC GGCGCGGTCA GGTCTATGCC
AGCAAGGGCG CGTACCGGTC GGCGATCAAG GACTTCGACG AAGCGATCCG GCTGAACGGC
AAGGATGTCG AAGCCTACAA CAACCGCTGC TGGGTCCGGA CCGTGATCGG CGAACTCGAG
CCCGCACTGG CCGACTGCGA TCAGGCGCTG CAGCTCCGGC CGAACTTCGT CGATGCGCTG
GATAGTCGCG GGCTGTTGCA TCTGAAGGGC GGCCGCGACA AGGCCGCGAT CGCCGATTTC
GACGCCGCGC TCAAGGTCAA TCCAAGGCTG ACGTCGTCGC TATACGGCCG CGGGCTGGCG
CGCAAACGGA TCGGGCTCGC CTCGGAAGGC GAGATCGACC TGACCACCGC CAAAAAGCTC
GATCCCAACA TCGGCAAGGA GTTCTCCGGC TACGGCGTGC AGTAG
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| Protein sequence | MKIHLGLVVL VFAAMIVAPR SYAADSSAPR VALVIGNSKY PDADKPLSQS VSDARELADD
LKRAGFDAEL GEDLSGDAMR RAFDRLYQRT KPGAAALVFF SGFGIQSGRQ SYLIPIDAQI
WTEPDVRRDG ISLETVLNEL NSRGASVKIA LIDASRRNPF ERRFRSFSAG LAPVIAPSGS
LVMYAAALSA VVTDNDSARS PFVTALREEI RAAGRSAEEA FNRTRTAVTR ASRGEQVPWI
SSSLAEDFVF TPGAKADKPA VAEPAKQPAA PAPAESAKPP TAPPETKPPQ AAEAKPSTSR
DDDKLVLALA SDPTVKSLTA QIADKPSDGN AYYRRGQVYA SKGAYRSAIK DFDEAIRLNG
KDVEAYNNRC WVRTVIGELE PALADCDQAL QLRPNFVDAL DSRGLLHLKG GRDKAAIADF
DAALKVNPRL TSSLYGRGLA RKRIGLASEG EIDLTTAKKL DPNIGKEFSG YGVQ
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