| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5151 |
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| Symbol | |
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| ID | 6412851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5549115 |
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| End bp | 5550383 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715041 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_001994114 |
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| Protein GI | 192293509 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.389186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCCCA ACGACCCGCG CCTGCGCTCC TTCGTCGATG TGAAACTGGA ATCGGACTTT
CCGATCCAGA ACCTGCCTTA CGGCGTTGTC TCGACGGTCG ACGATCCTGG TCCCCGCGTC
GGCGTCGCGA TCGGCGACTT CGTGCTCGAC CTCGCCATGC TGCAAACTGC GAAGCTGCTC
GACCTGCCGG AGGGCGTGTT CACGCAATCG TCGATCAATG CCTTCATGGC GCTCGGGCCG
AACGTCTGGC GCAGCACGCG GGCGCGGATC AGCGCGCTGC TTCGGCACGA CAATCCCGAG
CTGCGCGACC ATGCGGAGTT GCGCGCCAAG GCGCTGCTGC CGATGAGCCA AGTGAAGCTG
CATCTGCCGC TCCGCGTCGA GGGCTTCACC GATTTCTATT CGTCGAAGGA ACACGCCACC
AACGTCGGCA CCATGTTCCG GGACAAGACC AATCCGCTGC TGCCGAACTG GCTGCACATC
CCGATCGGCT ACAACGGCCG CGCCTCGACC GTGGTGGTCA GCGGCACCCA GATCCATCGC
CCGCGCGGCC AGCTCAAGCC GCCGTCGGCG GAGCTGCCGA GTTTCGGACC GTGCAAGCGG
CTGGATTTCG AACTCGAGAT CGGCGTGGTG GTCGGGCAGT CGTCGGCGAT GGGCACGATG
CTGACCGAAC AGCAGGCCGA GGAGATGATC TTCGGCTTCA CGCTGCTCAA CGATTGGAGC
GCGCGCGACA TCCAGCAATG GGAATACGTG CCGCTAGGGC CGTTCCAGGC CAAGGCGTTC
GCGACCTCGA TCAGCCCGTG GATCGTCACC CGCGAGGCAC TTGAGCCGTT TCGCGTTCAC
GGCCCCGTGC AGGATCCGGC GCCGCTGCCT TACTTGCAGC AGAAGGGCGC CAACAATTAC
GACATGGCGC TGGAAGTCGC CTTGCGGACG CCGACGATGC AACAGCCGGC GCGGATCAGC
GCGACCAATT TCAAATACAT GTACTGGTCG TCGGTGCAGC AGCTGGTGCA CCATGCCTCC
AGCGGCTGCG CGATGAGTGT CGGCGACCTG CTCGGCTCCG GGACGGTGTC GGGTCCGGAG
AAGGATCAGC TCGGCAGCCT GCTGGAATTG AGCTGGAACG GCACGGAGCC GCTGCAACTG
CCGGGCGGCG AGAGCCGCGG CTTCCTCGAA GACGGCGACA GCCTGGTGAT GCGCGGCTGG
TGCCAGGGCG ACGGCTACCG CGTCGGCTTC GGCGAGGTCG AGGGCACGGT GCTGGCGGCG
AGCGAGTAG
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| Protein sequence | MHPNDPRLRS FVDVKLESDF PIQNLPYGVV STVDDPGPRV GVAIGDFVLD LAMLQTAKLL
DLPEGVFTQS SINAFMALGP NVWRSTRARI SALLRHDNPE LRDHAELRAK ALLPMSQVKL
HLPLRVEGFT DFYSSKEHAT NVGTMFRDKT NPLLPNWLHI PIGYNGRAST VVVSGTQIHR
PRGQLKPPSA ELPSFGPCKR LDFELEIGVV VGQSSAMGTM LTEQQAEEMI FGFTLLNDWS
ARDIQQWEYV PLGPFQAKAF ATSISPWIVT REALEPFRVH GPVQDPAPLP YLQQKGANNY
DMALEVALRT PTMQQPARIS ATNFKYMYWS SVQQLVHHAS SGCAMSVGDL LGSGTVSGPE
KDQLGSLLEL SWNGTEPLQL PGGESRGFLE DGDSLVMRGW CQGDGYRVGF GEVEGTVLAA
SE
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