| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5143 |
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| Symbol | |
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| ID | 6412843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5536950 |
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| End bp | 5538437 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642715033 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001994106 |
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| Protein GI | 192293501 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACA GCGTCAGTGC CGCGATCACC GAGCCGCCGC AGGTTCCACC TGCGACCACC
GGGCGAGTCA TCGACACCGA TATTCCGGCA CGGCTCGACG GTCTGTTGTG GAGCCGTTTT
CATACCCGTG TGGTGGCTGC GCTCGGGATC ACCTGGATTC TGGACGGTCT CGAAGTCACG
CTGGCCGGAG CTCTCGCAGG CGCCCTGAAG GACAGCCCAA GTCTGCGATT CAGCAATCTC
GATGTCGGCC TGGCCAACAG CGCCTATCTG GCTGGTGCGG TGATCGGCGC GCTCGGGTTC
GGTTGGCTGA CCGACCGGAT CGGTCGGAAG AAACTGTTCT TCATCACCCT TGCGCTGTAT
CTCACCGCCA CTGCGGCGAC GGCGCTGTCG TGGAGCGTCA CCAGCTACGC GCTGTTCCGG
TTCCTCACCG GCGCAGGCAT CGGCGGTGAG TACACCGCGA TCAACTCCAC GATTCAGGAA
CTGGTGCCGG CGCGCTATCG CGGCTGGACC GATCTGGTGA TCAACGGCAG CTTCTGGATC
GGTGCGGCGA TCGGTGCGGT CTGCGCCATC GTGCTGCTCG ATCCGGCGGT GATCGATCCC
GATCATGGCT GGCGGCTGGC TTATCTGACC GGCGCTGCCA TCGGCCTTGT GGTGTTCGCG
ATGCGCTGGT GGATTCCGGA GAGTCCGCGC TGGCTGATGA TCCACGGCCA GCCCGAGCGC
GCCGAAGCGA TCGTCGCCGA CATCGAACAA AGCGCGCGTC ATGCGCCTGA TCGTCCGCGC
GTGCTGCCAA AGATCAAGCT GCGAATGCGC ACCCACACGC CGCTGCTCGA AGTCGCTAAG
ACCTTGTTTG GGACCTATCG TCAGCGCTCG CTGGTCGGGC TGGTCCTGAT GACCGCGCAG
GCATTCTTCT ACAACGCGAT CTTCTTCACC TATGCGTTGA TCCTGACCGA CTTCTTCGGC
ATCTCCGCCA ATCACGTCGG CTGGTACATA CTGCCGTTCG CGGCCGGAAA CTTCCTCGGT
CCGCTGCTGC TCGGTCGGTT GTTCGATACG CTCGGCCGCC GTACCATGAT CGGCTTCACC
TACGGCGTCT CGGGACTTCT GCTGGCGCTG TCGGGATATC TATTCTCGAT CGGGGCGCTC
AGCGCACAAA GCCAGACCAT CGCCTGGATG GTGATCTTCT TCTTCGCTTC GCCGGCGGCG
AGCGCGGCCT ATCTCACCGT CAGCGAAACC TTTCCGCTCG AAGTCCGTGC GCTGGCGATC
GCAATCTTTT ACGCGATCGG CACCGGCATC GGCGGTGTCG CCGGTCCGGC GCTGTTCGGT
GCACTGATCG ACACGGGCTC GCGCGGCAGC GTGTTCGCCG GTTATTTGTT CGGCTCGGTG
TTGATGATGG CAGCCGCGGT CATCGGCTGG CGCTATGGTA TCGCGGCCGA GCGCCGCTCA
CTCGAACACG TCGCGCGGCC GCTGGCCGCA ACAGAGGATA TTCGATGA
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| Protein sequence | MADSVSAAIT EPPQVPPATT GRVIDTDIPA RLDGLLWSRF HTRVVAALGI TWILDGLEVT
LAGALAGALK DSPSLRFSNL DVGLANSAYL AGAVIGALGF GWLTDRIGRK KLFFITLALY
LTATAATALS WSVTSYALFR FLTGAGIGGE YTAINSTIQE LVPARYRGWT DLVINGSFWI
GAAIGAVCAI VLLDPAVIDP DHGWRLAYLT GAAIGLVVFA MRWWIPESPR WLMIHGQPER
AEAIVADIEQ SARHAPDRPR VLPKIKLRMR THTPLLEVAK TLFGTYRQRS LVGLVLMTAQ
AFFYNAIFFT YALILTDFFG ISANHVGWYI LPFAAGNFLG PLLLGRLFDT LGRRTMIGFT
YGVSGLLLAL SGYLFSIGAL SAQSQTIAWM VIFFFASPAA SAAYLTVSET FPLEVRALAI
AIFYAIGTGI GGVAGPALFG ALIDTGSRGS VFAGYLFGSV LMMAAAVIGW RYGIAAERRS
LEHVARPLAA TEDIR
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