| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5131 |
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| Symbol | |
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| ID | 6412825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5517764 |
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| End bp | 5518909 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715016 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001994095 |
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| Protein GI | 192293490 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGC CAGTGGCTCT GCGCGCAGGA GGTTTCGGCG CGCGAGGAGC AGGATCGCAG
GCCGCACAAG AGCGGCAGGT CATCGGCTCT AGCATCGCGG TGCGCGAAGC AGAAAAGCGC
TACGGTCAGT TTCACGCGGT CGACCGGATC AATCTCGACA TCGATCCCGG CGAATTTATC
ACGCTGCTCG GCCCGTCGGG CAGCGGCAAG ACGACCTTGC TCAATCTGCT CGCCGGCTTC
CAGACCCTCG ACGGCGGCGA AATCCTGGTC GACGGCAAGC CGGTGCACAA CGTGCCGACG
CACAAGCGCG GCTTCGGCAT GGTGTTTCAG AGCTACGCGC TGTTTCCCAA CATGACGGTG
ACGCAGAACG TCGCGTTCCC GCTGCGCATG GCGGGCGTCG ACCGCGCCAC CACGGCGCGC
CGCGTCGCCG AGACGCTGGA GATCATGCGG CTGTCGGCCC ATGCCAACAA ATCGCCGTCG
GAAATGTCGG GCGGTCAGCA GCAGCGCGTC GCCATCGCAC GCGCGATCGT GATGCGGCCG
AAGGTCGTGC TGATGGATGA GCCGCTCAGC GCGCTCGACC GTCGCCTGCG TGAGTCGATC
CAGATCGAAA TTCGCGACCT GCACCAGACC ATCGGCAGCA CCATCCTGTT CGTCACCCAT
GATCAGGGCG AAGCGCTGAC CATGAGCGAT CGCATTGCTG TGCTGGATGC CGGCAAGATC
GTGCAGATCG GCCGTCCGCT CGACATCTAC CGTCACCCCG CCAATCGCTT CGTGGCCTCG
TTCGTCGGTG AGAGCAATCT GATCGAAGCG GAGATCATGC AGAAGCGCGG CACCACGGTG
ACGCTCAAGA ACCGGTCCGG CTACGTGTTC GACGCCGAGA GCCGCGACGC CATCGACGTC
GGCCGCGTCA CCGTGCTGGT GCGGCCCGAG CGGATCGCGA TTGCGGACGA GCCGACCGCG
AACTCGACCC CGGTGAACGT GACCTCGGCG ATCTTCCTCG GTGAGACACT GCGTATCGAA
GCGCAGATGG AAAGCGGCGA GACGCTGCTT GTGCGCTGCC CCGACAGCGC CAAGCGGCCG
TTGCCGAATG TCGGCGACCG ACTGCATGTC GGCTGGGGTC CGGAAGACTG CTGGGTGCTG
GCATGA
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| Protein sequence | MAEPVALRAG GFGARGAGSQ AAQERQVIGS SIAVREAEKR YGQFHAVDRI NLDIDPGEFI
TLLGPSGSGK TTLLNLLAGF QTLDGGEILV DGKPVHNVPT HKRGFGMVFQ SYALFPNMTV
TQNVAFPLRM AGVDRATTAR RVAETLEIMR LSAHANKSPS EMSGGQQQRV AIARAIVMRP
KVVLMDEPLS ALDRRLRESI QIEIRDLHQT IGSTILFVTH DQGEALTMSD RIAVLDAGKI
VQIGRPLDIY RHPANRFVAS FVGESNLIEA EIMQKRGTTV TLKNRSGYVF DAESRDAIDV
GRVTVLVRPE RIAIADEPTA NSTPVNVTSA IFLGETLRIE AQMESGETLL VRCPDSAKRP
LPNVGDRLHV GWGPEDCWVL A
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