Gene Rpal_5123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5123 
Symbol 
ID6412817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5507528 
End bp5508613 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content66% 
IMG OID642715008 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_001994087 
Protein GI192293482 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCA TCACTCTGAG GCAATTGCTG GATCACGCCG CCGAGCACGG CTACGGCGTG 
CCCGCGTTCA ACATCAACAA CATGGAGCAG GGCCTCGCGA TCATGGAGGC GGCGGCGCTG
GTCGACGCGC CGGTGATCAT CCAGGCGTCG CGCGGCGCCC GCTCCTACGC CAACGACATC
ATGCTGGCGA AGATGATCGA CGCGCTGGCC GAAATGTATC CGGACATCCC GCTGTGTATG
CATCAGGACC ACGGCAACGA CGAAGCCACC TGCGCCACCG CGATCCGCTA CGGCTTCACC
TCGGTGATGA TGGACGGCTC GCTCAAGGCC GACGCCAAGA CCGCCGCCGA TTATCAGTAC
AACGTCGACA TCACTCGCCG CGTCGTCGAC ATGGCGCACT GGGTCGGCGC CTCGGTGGAA
GGTGAGCTCG GCGTGCTCGG CTCGCTGGAG CACGGCGGCG GCGAGCAGGA AGACGGCCAC
GGCGTCGAGG GCAAGGTCAG CCGCGAACAG CTCCTGACCG ATCCGGACCA GGCGGTCGAG
TTCGTGCGCG CCACCAAGGT CGACGCGCTG GCGATCGCGA TGGGCACCTC GCACGGCGCC
TACAAGTTCA GCCGCAAGCC GGACGGCGAC GTGCTGGCCA TGAAGGTGGT CGAAGAGATC
CACCGCCGCC TGCCGAACAC CCACCTCGTG ATGCACGGCT CGTCGTCGGT GCCGCAGGAT
CTGCAGGACA TCTTCAACGA GTTCGGCGGC GCGATGCCGC AGACCTTCGG CGTGCCGGTC
GAGGAAATCG TGCGTGGCAT CAAGCACGGC GTCCGCAAGG TCAACATCGA CACCGACTGC
CGTCTGGCGA TGACCGGCGT GTTCCGGAAA GTCGCGACCC AGAACAAGGC GGAGTTCGAT
CCGCGCAAGT TCCTGAAGCC CGCGATGGAT GCGATGCGCG ACATCTGCAA GCTGCGCTTC
GAGCAGTTCG GCACCGCCGG CAATGCCTCG AAGATCAAGG TCGTGCCGAT GGCGGAGATG
GCCAAGCGCT ACAAGTCCGG CGCGCTCGAT CCGCAGATCG GCCAGGTCGC CCGCGCCGCG
GAGTAA
 
Protein sequence
MARITLRQLL DHAAEHGYGV PAFNINNMEQ GLAIMEAAAL VDAPVIIQAS RGARSYANDI 
MLAKMIDALA EMYPDIPLCM HQDHGNDEAT CATAIRYGFT SVMMDGSLKA DAKTAADYQY
NVDITRRVVD MAHWVGASVE GELGVLGSLE HGGGEQEDGH GVEGKVSREQ LLTDPDQAVE
FVRATKVDAL AIAMGTSHGA YKFSRKPDGD VLAMKVVEEI HRRLPNTHLV MHGSSSVPQD
LQDIFNEFGG AMPQTFGVPV EEIVRGIKHG VRKVNIDTDC RLAMTGVFRK VATQNKAEFD
PRKFLKPAMD AMRDICKLRF EQFGTAGNAS KIKVVPMAEM AKRYKSGALD PQIGQVARAA
E