| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5122 |
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| Symbol | |
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| ID | 6412816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5506084 |
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| End bp | 5507469 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715007 |
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| Product | ribulose bisphosphate carboxylase |
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| Protein accession | YP_001994086 |
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| Protein GI | 192293481 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCAGT CGAACCGCTA CGCCAACCTC AACCTCAAAG AGAGCGAGCT GATCGCGGGC
GGACGGCACG TGCTGTGCGC CTACATCATG AAGCCGAAGG CCGGCTTCGG TAACTTCATC
CAGACCGCCG CGCACTTCGC CGCCGAATCC TCGACCGGCA CCAACGTCGA AGTCTCCACC
ACCGACGACT TCACCCGTGG CGTCGACGCG CTGGTGTACG AGGTCGACGA GGCCAACAGC
CTGATGAAGA TCGCGTATCC GATCGAGCTG TTCGATCGCA ACGTGATCGA CGGCCGCGCC
ATGATCGCCT CGTTCCTGAC CCTGACGATC GGCAACAACC AGGGCATGGG CGACGTCGAA
TACGCCAAGA TGTACGACTT CTATGTCCCG CCGGCGTATC TCAAGCTGTT CGACGGCCCG
TCGACGACCA TCAAGGATCT GTGGCGCGTG CTCGGCCGCC CGGTGATCAA CGGTGGCTTC
ATCGTCGGCA CCATCATCAA GCCGAAGCTC GGCCTGCGCC CGCAGCCGTT CGCCAACGCC
TGCTACGACT TCTGGCTGGG CGGCGACTTC ATCAAGAACG ACGAGCCGCA GGGCAACCAG
GTGTTCGCGC CGTTCAAGGA CACGGTGCGT GCCGTGGCCG ACGCGATGCG CCGCGCGCAG
GACAAGACCG GCGAGGCCAA GCTGTTCTCG TTCAACATCA CCGCCGACGA TCACTACGAA
ATGCTGGCGC GCGGTGAGTT CATCCTCGAG ACCTTCGCCG ACAACGCCGA CCACATCGCG
TTCCTGGTCG ACGGCTACGT CGCCGGCCCG GCCGCGGTCA CCACCGCTCG CCGCGCGTTC
CCGAAGCAGT ACCTGCACTA CCATCGCGCC GGCCACGGTG CGGTGACCTC GCCGCAGTCC
AAGCGCGGCT ACACCGCCTT CGTGCTGTCG AAGATGGCGC GTCTGCAGGG CGCCTCGGGC
ATCCACACCG GCACCATGGG TTTCGGCAAG ATGGAAGGCG AAGCGGCCGA CCGCGCGATT
GCCTACATGA TTACCGAGGA CGCTGCTGAC GGTCCGTACT TCCACCAGGA GTGGCTCGGC
ATGAACCCGA CCACCCCGAT CATCTCCGGC GGCATGAACG CGCTGCGGAT GCCGGGCTTC
TTCGACAACC TCGGCCACTC CAACCTGATC ATGACGGCGG GCGGTGGTGC GTTCGGTCAC
GTCGACGGCG GCGCGGCGGG TGCGAAGTCG CTGCGTCAGG CCGAGCAGTG CTGGAAGCAG
GGCGCCGATC CGGTCGAGTT CGCCAAGGAT CACCGCGAAT TCGCCCGCGC CTTCGAGAGC
TTCCCGCAGG ACGCCGACAA GCTGTATCCG AACTGGCGCG CCAAGCTGAA GCCGCAGGCG
GCGTAA
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| Protein sequence | MDQSNRYANL NLKESELIAG GRHVLCAYIM KPKAGFGNFI QTAAHFAAES STGTNVEVST
TDDFTRGVDA LVYEVDEANS LMKIAYPIEL FDRNVIDGRA MIASFLTLTI GNNQGMGDVE
YAKMYDFYVP PAYLKLFDGP STTIKDLWRV LGRPVINGGF IVGTIIKPKL GLRPQPFANA
CYDFWLGGDF IKNDEPQGNQ VFAPFKDTVR AVADAMRRAQ DKTGEAKLFS FNITADDHYE
MLARGEFILE TFADNADHIA FLVDGYVAGP AAVTTARRAF PKQYLHYHRA GHGAVTSPQS
KRGYTAFVLS KMARLQGASG IHTGTMGFGK MEGEAADRAI AYMITEDAAD GPYFHQEWLG
MNPTTPIISG GMNALRMPGF FDNLGHSNLI MTAGGGAFGH VDGGAAGAKS LRQAEQCWKQ
GADPVEFAKD HREFARAFES FPQDADKLYP NWRAKLKPQA A
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