Gene Rpal_5107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5107 
Symbol 
ID6412801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp5490192 
End bp5490977 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID642714992 
ProductLRV FeS4 cluster domain protein 
Protein accessionYP_001994071 
Protein GI192293466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTG ACATCGACGA AGCCCGCGAT TGGCAGGGCA ACGAGGTCGA TTGCGCGTCG 
TGCCCGCATC ACGAGCTGCT GTCCGCCGGG CTGTGCGAAT TGAAGAAGGC TTGTGTCCAG 
GACCGCTATG CGCGGCGGCT GGAGCGGTTC TTCCAGCAGA ATCGCGCGCT CGCTGACTCC 
TATCTCGACC ATCCGTATTT CGAAACGCGC GCGGTCGCGG CCGGCTACGC CACAGTGTTT 
CTGCTCCCGA AGCTGCTGCA GGATCCCGAC GAGACGGTGC GGTGGAGCGC GGCACGCCGG 
CTGCCCAAGC GCTATCTGCT CGGCCTGCGC AGCGACCCGC ATCGCGAGGT GCGGATCCGC 
GTCGCCTCGG TGCTCAGCGA CGACGAGCTG CGCCCGATGG CGAGCGACGA AGACTACTAT 
GTTCGCCAGA TCGTGGCGCG GCGGGCTTCG CCCGGCCTGC TGCCGCTCTT GGTGCTCGAT 
CCCGATCCTG GCGTGCGCCG CGAAGTGGCG CGGCGGATCG GCACGGAATG GCTCGCGCAG 
ATCGCGATGG ATAAAGACGG CGAAGTCCGT CTCGAAGCCG CCAGGCGGAT GACGCCGGGC 
CGGCTGCTGG CGATGCTCGG CGACGCCGAT TGGCGGGTTC GCTACGAAGT CGCCAGCCGT 
GTCGACGCCT ACGAACTGGC GCCGCTGCTC GACGATCCCG ATCCGCTGGT GCGCGAGCTT 
GCGCGCAGCC GCAGCGGCTT CACCGAACCT GCCCAGCTCA AACCCGCAAC GGAGCCCTCG 
CCATGA
 
Protein sequence
MTTDIDEARD WQGNEVDCAS CPHHELLSAG LCELKKACVQ DRYARRLERF FQQNRALADS 
YLDHPYFETR AVAAGYATVF LLPKLLQDPD ETVRWSAARR LPKRYLLGLR SDPHREVRIR 
VASVLSDDEL RPMASDEDYY VRQIVARRAS PGLLPLLVLD PDPGVRREVA RRIGTEWLAQ 
IAMDKDGEVR LEAARRMTPG RLLAMLGDAD WRVRYEVASR VDAYELAPLL DDPDPLVREL 
ARSRSGFTEP AQLKPATEPS P