Gene Rpal_5092 details

Gene Information

• Locus tag: Rpal_5092
• ID: 6412786
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 5478438
• End bp: 5479148
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642714977
• Product: NifQ family protein
• Protein accession: YP_001994056
• Protein GI: 192293451

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGGCG CAGCGGGAAT CCAGGCGGCA GGTGCGACGG CAGCGGCGCT GCCGCTGCGC 
GTGACGGCGT CGAGCTTCGC GTCCTCTCCG GCGGTGGTGT ACCGGGCCTT GACCGGCTGC 
ACCCCGGCCG AAGCCCAGAT CGATGACGAC CGTGCGTTCG ATCGTCACGT GCTGGCATCG 
ATCCTGTCGG TTGCGGTCAC CGAACCCGGC TCGATCACCG AGTCCAGTGG TCTGACGGCC 
GACGATTTTG CGGCGCTGAT CGTCGGCTGG TTCCCGCACG TCTCGGTCCT CTTGTCAGTG 
CTGGCAGTCG GCGAGCATGA CGAGGACGAG GAAGCCGCCA TGGTCCGCGA CCTGCTGCTC 
AAGCACCGCT CGACCTCCGG TGAGGTCGGC CGTTGGCTCG CCGCGATGGT GGCGCGGCGG 
GCGATGCAGC CGGAACATCT GTGGGAGGAT CTCGGCCTGC GCAGCCGTAC CGAGCTGAGC 
CGGCTGCTGA TGCGGCATTT CGAGCCACTG GCCCGCGACA ACACCCGCAA CATGCGCTGG 
AAGCGGTTCT TCTACCGCAA GCTCTGCGAA GACGACGGTA TGGTGATGTG CAGCACCCCC 
GTCTGCTCGC AGTGCGGCGA CTTCGCCGAA TGCTTCGGCG AGGAGAGCGG CGAAAGCCGG 
ATGGCGATCC GCCGCCGCGA GGTCGAACTG CGATCGGTCG GCGTGGCCTG A 

 

Protein sequence

MLGAAGIQAA GATAAALPLR VTASSFASSP AVVYRALTGC TPAEAQIDDD RAFDRHVLAS 
ILSVAVTEPG SITESSGLTA DDFAALIVGW FPHVSVLLSV LAVGEHDEDE EAAMVRDLLL 
KHRSTSGEVG RWLAAMVARR AMQPEHLWED LGLRSRTELS RLLMRHFEPL ARDNTRNMRW 
KRFFYRKLCE DDGMVMCSTP VCSQCGDFAE CFGEESGESR MAIRRREVEL RSVGVA