Gene Rpal_5084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5084 
Symbol 
ID6412778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5470399 
End bp5471706 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content63% 
IMG OID642714969 
ProductElectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_001994048 
Protein GI192293443 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAG AACGTTTCGA CGCCATCGTC GTCGGGGCCG GCATGGCCGG CAACGCCGCT 
GCGCTGACCA TGGCCAAGCG TGGCCTGAAG GTGCTGCAGA TCGAGCGCGG CGAGTACCCG
GGTTCGAAGA ACGTGCAAGG GGCGATTCTC TACGCCGACA TGCTGGAGAA GCTGGTGCCC
GACTTCCGCG AGGACGCGCC GCTCGAGCGG CACCTCGTCG AACAGCGGTT CTGGATGATG
GACGGCAAGT CGCACACCGG CCTGCATCAC CGCTCGGAAG ACTTCAACGA AGAGAAGCCG
AACCGCTACA CCATCATCCG CGCCCAGTTC GACAAATGGC TGTCCAGCAA GGCGCAGGAA
GCCGGTGCGA TCGTGCTGTG CGAAACCACC GTCAAGGAAC TGGTGCAGGA CGCTTACGGC
AAGGTGATCG GCGTGATCAC CGATCGTGAC GGTGGCCAGG TTCATGCCGA CGTCGTGGTA
CTGGCCGAAG GCGTCAACGG CCTGCTCGGC ACCAAGGCCG AGCTGCGTGA GCGCCCGACG
CCGGAGAACG TCGCGCTGGC TGTGAAGGAA ATGCACTTCC TGCCGCGCGA GACCATCGAA
GCCCGCTTCA ACCTGAAGGG CGACGAGGGC GTGGTGATCG AGGCGGCGGG CACCATCTCG
GCCGGCATGA CCGGCATGGG CTTCATCTAC ACCAACAAGG AGTCGATCTC GATCGGCATC
GGCTGTCTGG TGTCGGACTT CCAGAAGACC GGCGAGACCC CCTACGGCCT GCTCGAGCGC
TTCAAGAAGC ATCCGTCTGT GGCGCCGCTG ATCGAAGGCT CCGAGGTGAA GGAATACGCT
GGCCATCTGA TCCCGGAAGG CGGCTACAAT GCGATCCCGC AACTCTATGG CGACGGCTGG
GTCGTGGTCG GCGATGCCGC GCAGCTCAAC AACGCGATGC ACCGCGAGGG CTCGAACCTG
GCGATGACCT CGGGCCGGAT CGCCGCCGAG GCGATCTTCC AGGTGAAGTC GCGCAAGGAT
CCGATGACCA AGGAAAATCT GGCGCTCTAC AAGAAGATGC TGGACGACTC CTTCGTCATC
AAGGACCTGA AGAAGTACAA GGATATGCCG GATCTGCTGC ATATCCGCTC GCAGAACTTC
TTCCTGACCT ATCCGCAGCT CGTCAACAAG GCGCTGCAGA ACTTCGTGCG GGTCGACGGC
ACGCCGAAGA TCGAGAAGGA AAAGACCACG ATCAAGTCGT TCGTGTCGGC ACGGTCGTGG
GGCGGATTGT TCGGCGATGC GTTCCGCTTC GCGCGGGCGT GGCGATAA
 
Protein sequence
MIEERFDAIV VGAGMAGNAA ALTMAKRGLK VLQIERGEYP GSKNVQGAIL YADMLEKLVP 
DFREDAPLER HLVEQRFWMM DGKSHTGLHH RSEDFNEEKP NRYTIIRAQF DKWLSSKAQE
AGAIVLCETT VKELVQDAYG KVIGVITDRD GGQVHADVVV LAEGVNGLLG TKAELRERPT
PENVALAVKE MHFLPRETIE ARFNLKGDEG VVIEAAGTIS AGMTGMGFIY TNKESISIGI
GCLVSDFQKT GETPYGLLER FKKHPSVAPL IEGSEVKEYA GHLIPEGGYN AIPQLYGDGW
VVVGDAAQLN NAMHREGSNL AMTSGRIAAE AIFQVKSRKD PMTKENLALY KKMLDDSFVI
KDLKKYKDMP DLLHIRSQNF FLTYPQLVNK ALQNFVRVDG TPKIEKEKTT IKSFVSARSW
GGLFGDAFRF ARAWR