| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5044 |
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| Symbol | |
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| ID | 6412738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5425625 |
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| End bp | 5426539 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714929 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001994008 |
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| Protein GI | 192293403 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACC AATCGATCCC TGATCCGGTA ATGTCGTTCG ACGACAAAGC GCGGATGATT
CAGCACCGCC GTTCGATCCA CGGCGCCATC ATCGGCCTGC AGCTCGACCG CTACGCACCC
GCGGAAGCGT GGAGCAGCCT GCCCTATCAC CCGGTATTCG TCGGCGACGT TTCGACCGGC
GTGATCCATG GCGGCGTCGT CACCGCGATG CTCGACGAGA GCTGCGGCAT GGCGGTGCAG
CTCGCGCTGC CCGGCACCAC CGCGATCGCC ACGCTCGACC TGCGGATCGA TTACTTGCGA
CCGGCGACAC CCGGACAGGT GATGCGCGCG CACGCGCATT GCTATCACCT CACCCGTTCG
ATCGCGTTCG TCCGCGCCAC CGCGTATCAG GACGCCGAGG ACGTTCCGAT CGCCACCGCC
ACCGCGATGT TCATGGTCGG CGCCAACCGC ACCGATATGC TGCGGCAGAC GCCGAAGGTG
ACGATGGACT CCGCGCCCGA GCTGGTCGCC CCCGAAGATC CGGACGGCGG GCCGCTTGCG
ATCAGCCCGT ATCCACGCTT CCTCGGCATC CGCGTCGATG GCGATGCCCA GGCGATGATG
CCATATCATC CGAAGCTGGT CGGCAATCCG ATCCTGCCGG CGCTGCATGG CGGCGTGATC
GGCGCCTTCC TGGAGACCGC CGCGATCGTC AGCGTGCGCC GAGAGATCGG CCTCGCCACC
GCGCCGAAAC CGATCGGGCT CACCGTGAAC TATCTGCGTT CGGGCCGGCC GCTCGACACC
TTCGCCAAGG TCTCGATCGT CAAGCAGGGC CGCCGGGTGG TTGCGTTCGA AGCGCAGGCC
TATCAGCGCG ATCCGGCCGA GCCGATCGCG TCGTGCTACG GCCACTTCAA GCTGCGCTCC
GGCCCGGCGG AGTAA
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| Protein sequence | MSDQSIPDPV MSFDDKARMI QHRRSIHGAI IGLQLDRYAP AEAWSSLPYH PVFVGDVSTG
VIHGGVVTAM LDESCGMAVQ LALPGTTAIA TLDLRIDYLR PATPGQVMRA HAHCYHLTRS
IAFVRATAYQ DAEDVPIATA TAMFMVGANR TDMLRQTPKV TMDSAPELVA PEDPDGGPLA
ISPYPRFLGI RVDGDAQAMM PYHPKLVGNP ILPALHGGVI GAFLETAAIV SVRREIGLAT
APKPIGLTVN YLRSGRPLDT FAKVSIVKQG RRVVAFEAQA YQRDPAEPIA SCYGHFKLRS
GPAE
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