| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5043 |
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| Symbol | |
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| ID | 6412737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5424748 |
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| End bp | 5425497 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714928 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_001994007 |
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| Protein GI | 192293402 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGAC TGATCGTGAT GGTGCTGGGG CTGTCGCTGG CAGCGCCGGC CTTGGCCGCG
GAAGCGGTGG TGAAGGACGG CGACACCCTG CAGCTCGGTG ACAAGGTCTT CCGGCTGGAA
GGGGTCGATG CGCCCGAGCT CGATCAGCGC TGCGTCAACC AGTTCGCCGA TCCATCGGCC
TGCGGCCTCG AAGCCCGCGA TGCGCTGGTC AAGCTGATCG GCGGCCGCAG CGTCACCTGC
CGCGATCTCG GGCCGGACCC GGTCTTCAAG GGGCGCCGGC TCGGCACCTG CGCGATTGCC
GGCGAGACCG ACAGCCTCAG CCGCCGGCTG GTGCAGGACG GCTTCGCCCT CAATGCCGCC
GCCAGCGGCA AGGATCGCTT TGCCGGCGAT GAGACCAAGG CCAAGGACGA GCGCAAGGGG
CTGTGGCAGG GCTGCTTCGT CGCGCCTAAC GATTTCCGCC GCTGGGACAA GGACGCCCCG
CTGCGCGGTG CCGCCTGCCG CGAGGACAAA CACAGCGAGC TGATCGAGGC GATGTTTCCC
GATCAGCCGG CGATGCTGCC GGGCTGCACC ATCAAGGGCA AGCTCGCACG CCGCGCCCGC
ATCACCGGCA ATGTCGGCGT GTATCAGCTG CGCGGCTGCC CGAGTTACGC CAGCCTGACC
AAGCCTAACC GCTGGTTCTG CTCGGAAGAC GATGCCCGCG CAGCCGGCTA CCGGAAGGCC
TACAACTGCC GGATCAAGCT GACGCCGTAA
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| Protein sequence | MRRLIVMVLG LSLAAPALAA EAVVKDGDTL QLGDKVFRLE GVDAPELDQR CVNQFADPSA
CGLEARDALV KLIGGRSVTC RDLGPDPVFK GRRLGTCAIA GETDSLSRRL VQDGFALNAA
ASGKDRFAGD ETKAKDERKG LWQGCFVAPN DFRRWDKDAP LRGAACREDK HSELIEAMFP
DQPAMLPGCT IKGKLARRAR ITGNVGVYQL RGCPSYASLT KPNRWFCSED DARAAGYRKA
YNCRIKLTP
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