| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5036 |
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| Symbol | |
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| ID | 6412730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5418043 |
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| End bp | 5419068 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714921 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001994000 |
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| Protein GI | 192293395 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGACAA GCGTGGCTTG GGCGGTGGCG TTGTCGCTGC CGGTGACGAT GGCTTTGGCG
CCTGCTCAGG CGCTCGAACT CAAGGTTGCC GACTCATTTC CCGCCGGGCA CTACCTCGTC
CGCCTGATGT TGAAGCCGTG GATGGACGAC GTCACCAAGC GCACCAACGG CGCGGTGACC
TTCAGCTATT ATCCCAACCA GCAGATGGGC AAGGCCACCG ATCTGTTGCG TCTGACCCAG
TCGGGCGTCG TCGACATCGG CTACATCGCC CCGTCCTACG CCTCCGACAA GATGCCGCTG
TCCGAAGTGG CGCAACTGCC GGAGTCGTTC ACGACGAGCT GCCAGGGCAC GATGGCCTAT
TGGAAGAGCG CGCGCGACGG CGTGCTCGCC AGGCAGGAAT ACGCGCCCAA CAAGATCAAG
CTGCTGATGG CCGTGGTGCT GCCGCCGTAT CAGGTGTTCA CGGTCAAGCA GAAGGTCGAC
TCGATGGACA CGATCCAGGG CCTGAAGCTG CGCTCGACCG GCGGCGCTCA GGACCTGACG
TTGCGCGCGC TCGGCGCCGT GCCGGTGCGC ATGGCGGCGC CCGACGCCTA TGAGTCGCTG
GCGCGCGGGA CGATGGATGG CGTGCTGTTC CCGGCCGACA GCATCGCGTC CTACGGCCTC
GATAAACTGG TCAAGCATGC CACCGACGGC GTCAGCTTCG GCTCCTTCAT CGTCGCCTAT
TCGATCAGCG AGCGGGCGTG GGCCAAGCTG CCGGACGACG TCAAGAAGGC GATGGAAGAA
GCTTCCGAGG CGATCGAGCC GAAGGTGTGT TCGGACGTCG ACAAGGAGCA GCTGCAGACC
CGCAAGCAGC TCAACGAAGC GGGCGTGACC TTCGATCCGA TCCCCGACGC CACCAAGGCG
CAGATGAAGG ACAAGCTCAA AGGCGTCGCC AAGGAATGGG CCGCGGGCGT CGACTCCCGC
GGCAAGCAAG GCACGCAGGC GCTCGAAGAG TTTCAGAGCC TGCTCGCCGC TGGTGCGAGC
AAGTAA
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| Protein sequence | MRTSVAWAVA LSLPVTMALA PAQALELKVA DSFPAGHYLV RLMLKPWMDD VTKRTNGAVT
FSYYPNQQMG KATDLLRLTQ SGVVDIGYIA PSYASDKMPL SEVAQLPESF TTSCQGTMAY
WKSARDGVLA RQEYAPNKIK LLMAVVLPPY QVFTVKQKVD SMDTIQGLKL RSTGGAQDLT
LRALGAVPVR MAAPDAYESL ARGTMDGVLF PADSIASYGL DKLVKHATDG VSFGSFIVAY
SISERAWAKL PDDVKKAMEE ASEAIEPKVC SDVDKEQLQT RKQLNEAGVT FDPIPDATKA
QMKDKLKGVA KEWAAGVDSR GKQGTQALEE FQSLLAAGAS K
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