| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5029 |
|---|
| Symbol | |
|---|
| ID | 6412722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 5410921 |
|---|
| End bp | 5411367 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642714913 |
|---|
| Product | protein of unknown function DUF1486 |
|---|
| Protein accession | YP_001993993 |
|---|
| Protein GI | 192293388 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCG AGGCTTCGGG GATCGCGCCG GCCGCGCAGA GGACGCTGGC GCTCTGGCAC
GACATGTTCG TCAGCCGGGA CTGCGACCGG ATGCGGCCTC TGCTCGCCGA CGCGGTCGTG
CTGCACTCCC CGGTGGTGCG GTCGCCGATC GCCGGCCGCC CCGCCTGTTT GCTGGTTCTG
TGCACCGTCT CCAGCATCTT TCAAGGCTTT CGCTACCATC GCACCTATAT CGGTGACTCC
CAACAGGTCG CGCTGGAATT CAGCGCTGCG ATCGAAACCT GGGATCTGAA GGGCATGGAC
CTGATGCGTT TCAACGACGA CGGCCAAATC GCCGAATTCG AGGTCCTGAT CCGCCCGTTG
CGGGCGCTGT CGGCGCTGGG CGAGGAAATC GGCCGCCGCA TCGGACCACA GCTGATGCAG
CTTAAGCGCA CCGATCCGGT CCGCTGA
|
|---|
| Protein sequence | MTIEASGIAP AAQRTLALWH DMFVSRDCDR MRPLLADAVV LHSPVVRSPI AGRPACLLVL
CTVSSIFQGF RYHRTYIGDS QQVALEFSAA IETWDLKGMD LMRFNDDGQI AEFEVLIRPL
RALSALGEEI GRRIGPQLMQ LKRTDPVR
|
|---|
| |