| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5027 |
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| Symbol | |
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| ID | 6412720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5408914 |
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| End bp | 5410605 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642714911 |
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| Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001993991 |
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| Protein GI | 192293386 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGATT CAAGTTCTGA GGACGACCGG CAGGGTGCCT CTCAGGCCAG GCCTGTCGAT
CGCCACGATC AGACCTTTCC GGTGTTGACC GCGACCGAGA TCGATCGGAT CCGGCGGTTC
GGTGAGGTGC GGAGCTATGC CGACGGCGCG CGGCTGTTCG AGACCGGTCA ACCTGGCCCG
GGGATGTTCG TGGTGCTGTC CGGCCATGTC GCGGTCACTC AGCGCGACGG GCTGGGCCAC
ATCACACCGG TGGCCGAGCA GGGGCCGGGG CAATTTCTCG CCGAGATCGG CCAATTGTCA
GGCCGCGTCG CGCTGGTCGA TGGCATCGCC GAAGGTGAGG TCGAGTGCCT TCTGATCCCA
CCGGACCGGC TGCGCGGCCT GCTGGTTGCC GAGGCTGACC TTGGCGAGCG GATCATGCGG
GCGCTGATCT TGCGGCGGGT CAATCTGATT CAAGGCGGCG TTGGCGGTCC GGTTCTGATC
GGCTCGGCGA ACGCCTCGGA CGCGGTGCGG CTGATGGGGT TCCTCACCCG CAACGGCTGG
CCGCACCATC TGCTCGATCC GGCGACCGAT CACGACGCCG CCGAGCTGGT GGCACGCTAT
TCGCCGACGC CGCGCGACCT GCCGCTGGTG GTGACGCCGG ACGGCACCGT GCTGCGCAAC
CCCAGCGAAT CCGAGTTGGC GCTGGCGATG CGCATGAACG GCCACATCGA CCGTTCCAAG
CTGTACGACG TCGCCATCGT CGGCTCCGGG CCGGCGGGGC TGTCGACTGC GGTGTATGCG
GCGTCAGAAG GGCTCACCGT GGCGGTATGC GATCAGCGCG CTTTCGGCGG CCAGGCCGGC
GCCAGCGCGC GGATTGAGAA TTATCTCGGC TTCCCGACCG GCATCTCCGG CATGGCGCTG
ACCGCGCGGG CTTACAATCA GGCGCAGAAA TTCGGCGCCG ATATCATGAT CCCGACCGAG
GTGAAGTCGC TGGTGTGCGG CTGCAACGAC GGCACGTTCA AGTTGACGCT GGACGATGGC
GGCGAGCTGC GCGCCCGCGC CATCGTGGTC GCCAGCGGCG CGCGCTATCG CCGGCCGCAG
ATCGAGCGGC TCGCAGAATT CGAAGGCCGC GGCGTGTATT ATTGGGCGTC GCCGATCGAA
GCGCGGCTGT GCAAGCAGCA GGAGGTGATT TTGGTCGGCG GCGGCAATTC GGCCGGGCAG
GCTGCGGTGT TTCTGTCGGG CCATGCGGCG CGGGTCCATA TGGTAGTTCG CGGCGGCGGG
CTCGCCGCCA GCATGTCGCG CTATCTGATC GAGCGGATCG AATCGACGCC GAATATCGAG
CTGGTGTTCA ACACCGAGGT GGTGGCGCTC GACGGTTCGG CCGACAGCGG CCTGCAGCAG
GCGACGCTGC GCAGCCGGCT GTCCGGGGAG GACCGGATCA TGGCGGTCAG CAACCTGTTT
CTGTTCGTCG GTGCCGATCC GGCGACCGCC TGGCTCGACG GATGCGGCGT CACGCTCGAC
CGCGCCGGCT TCGTCGTCAC CGGCGCGCCC TCGGCGGATG AAGGCCAGCG GCCGGCGCAG
GCGCTGGAGA CCTCGGTGCC CGGGGTGTTC GCGGTGGGCG ACGTCCGCTC AGGCTCGGTC
AAGCGGGTCG GCGGTGCGAT CGGCGAGGGC GCCCAGGTGG TCGCGGCGCT GCACGGCTAC
CTGGCCGGCT AA
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| Protein sequence | MADSSSEDDR QGASQARPVD RHDQTFPVLT ATEIDRIRRF GEVRSYADGA RLFETGQPGP
GMFVVLSGHV AVTQRDGLGH ITPVAEQGPG QFLAEIGQLS GRVALVDGIA EGEVECLLIP
PDRLRGLLVA EADLGERIMR ALILRRVNLI QGGVGGPVLI GSANASDAVR LMGFLTRNGW
PHHLLDPATD HDAAELVARY SPTPRDLPLV VTPDGTVLRN PSESELALAM RMNGHIDRSK
LYDVAIVGSG PAGLSTAVYA ASEGLTVAVC DQRAFGGQAG ASARIENYLG FPTGISGMAL
TARAYNQAQK FGADIMIPTE VKSLVCGCND GTFKLTLDDG GELRARAIVV ASGARYRRPQ
IERLAEFEGR GVYYWASPIE ARLCKQQEVI LVGGGNSAGQ AAVFLSGHAA RVHMVVRGGG
LAASMSRYLI ERIESTPNIE LVFNTEVVAL DGSADSGLQQ ATLRSRLSGE DRIMAVSNLF
LFVGADPATA WLDGCGVTLD RAGFVVTGAP SADEGQRPAQ ALETSVPGVF AVGDVRSGSV
KRVGGAIGEG AQVVAALHGY LAG
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