| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5024 |
|---|
| Symbol | |
|---|
| ID | 6412717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5406584 |
|---|
| End bp | 5407873 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642714908 |
|---|
| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001993988 |
|---|
| Protein GI | 192293383 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
|---|
| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGGA TCAAGATCAT CGGCGGCAAC GAGCTGCGGG GCACCATCCC GATTTCGGGG
GCCAAGAACG CGGCGCTGCC CCTGATGATC GCGGCCCTGC TGACCGACGA GACCCTGATT
CTCGACAATG TGCCGCGTCT GGCCGACGTC GCGCTGTTGC AGCGGATCCT CGGCAACCAC
GGCGTCGACA TCATGGCGGC CGGCAAGCGT CCGGGCGACC ATGAATATCA GGGCCAGACC
CTGCACATTT CCGCCAAGAC CATCGTCGAC ACCACCGCGC CGTATGACCT GGTGTCGAAG
ATGCGCGCCA GCTTCTGGGT GATCGCGCCG CTGGTGGCGC GGATGCACGA AGCGAAGGTT
TCGCTGCCGG GCGGCTGCGC GATCGGCACC CGGCCGGTCG ACCTTCTGAT CATGGCGCTG
GAAAAGCTCG GCGCCGAGAT CACGATCGAC GGCGGCTACG TCATTGCAAA GGCGCCCGGC
GGCCTGAAGG GCGCGACCAT CGCGTTCCCC AAGGTTACCG TCAGCGGCAC CCATGTGGCG
GTGATGGCGG CGGCGCTCGC CAAGGGCACC ACCATTATCG ACAATGCGGC GTGCGAGCCT
GAGATCGTCG ACGTCGCCGA CTGCCTCAAT AAGATGGGCG CGAAGATCAC CGGTGCCGGC
ACCCCGCGCA TCACCATCGA GGGCGTCGCC AAGCTGCACG GCGCGCGCCA CACCGTGCTG
CCGGACCGGA TCGAGACCGG CACCTATGCG ATGGCGGTGG CGATGGCAGG CGGCGAGGTG
CAGCTTTCCG GTGCCCGTCC CGAGCTGCTG CAGGCGGCGC TCGACGTGCT GACCCAGGCC
GGCGCCACCA TCACGGTCAA CAACGACGGC ATCAAGGTCG CGCGCAACGG CGCCGGCATC
AGCCCGGTGA CCGTCACCAC CGCGCCGTTC CCCGGCTTCC CGACCGATCT GCAGGCGCAG
TTGATGGCGC TGATGACCCG CGCCAAGGGC GCCTCGCACA TCACCGAGAC GATCTTCGAA
AACCGCTTCA TGCACGTCCA GGAGCTGGCA CGGTTCGGCG CCAAGATCTC GCTCGATGGC
GAGACCGCGA CCATCGACGG CGTCGAGCGG CTGCGCGGCG CGCCGGTGAT GGCGACCGAC
CTGCGCGCCT CGGTCTCGCT GGTGATCGCG GCGCTCGCTG CCGAAGGCGA GACCATGGTC
AACCGCATCT ATCATCTCGA CCGCGGCTTC GAACGGCTCG AAGAGAAGCT GTCGGCCTGC
GGCGCCAACA TCGAGCGCAT CAGCGGCTGA
|
|---|
| Protein sequence | MDRIKIIGGN ELRGTIPISG AKNAALPLMI AALLTDETLI LDNVPRLADV ALLQRILGNH
GVDIMAAGKR PGDHEYQGQT LHISAKTIVD TTAPYDLVSK MRASFWVIAP LVARMHEAKV
SLPGGCAIGT RPVDLLIMAL EKLGAEITID GGYVIAKAPG GLKGATIAFP KVTVSGTHVA
VMAAALAKGT TIIDNAACEP EIVDVADCLN KMGAKITGAG TPRITIEGVA KLHGARHTVL
PDRIETGTYA MAVAMAGGEV QLSGARPELL QAALDVLTQA GATITVNNDG IKVARNGAGI
SPVTVTTAPF PGFPTDLQAQ LMALMTRAKG ASHITETIFE NRFMHVQELA RFGAKISLDG
ETATIDGVER LRGAPVMATD LRASVSLVIA ALAAEGETMV NRIYHLDRGF ERLEEKLSAC
GANIERISG
|
|---|
| |