| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5003 |
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| Symbol | |
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| ID | 6412695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5387398 |
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| End bp | 5388663 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714886 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001993967 |
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| Protein GI | 192293362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.408823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCCA GCCCTCCCCA GACCCTGGCG CGGCCGCTCG ACGCGCTGAA CTTCTTCCTC
GCCGACGTGC GCGACGGCCT CGGGCCATAT CTGGCGATCT ACCTGCTGGC CGTGCAGAAC
TGGAACGAGG CGTCGATCGG GCTGGTGATG TCGATCGCCG CGGCGGCCGG CATCGCAGCT
CAGACCCCAG CCGGGGCACT GATCGACCGC TCCACCGCCA AGCGCGCGCT GATCATCGCG
GCCGCTCTGG TCGTGACCGC CGCATCGGTG GTGCTGCCGT GGCTGGACAG TTTCGTGCTG
GTGGCGGCGA CCCAGGCGCT GGCAGCGGCT GCTGGCGCGA TCTTTGCGCC CGCGGTGGCG
GCGCTAACGC TGGGCATCGT CGGGCCGCGC GCCTTCGCCC GTCGGACCGG CCGCAACGAA
GCCTTCAACC ACGCCGGCAA CGCGGTGGCG GCGATGCTCA CCGGCGCGTT CGCCTATGGG
TTCGGCCCCG GCGTGGTGTT CTGGCTGATG GCCGCGATGG CGCTCGCCAG CATCTTCGCC
ACGCTGGCGA TCCCAGCCGC GGCGATCGAC GATCACGTCG CCCGCGGGCT CGGCGACGAT
CACGAGCGCG GCGCGCATCA CGACCAGCCG TCCGGCTTTA AGGTGCTGCT GACGTGCCGG
CCGCTCTTGA TCTTCGCCGG CGCCACCGTG CTGTTTCACT TCGCCAATGC GGCGATGCTG
CCGCTGGTCG GACAGAAGCT GGCGCTGGTG AACAAGAACC TCGGCACCAC GCTGATGTCG
GTGTGTATCG TCGCCGCGCA GCTCGTGATG GTGCCGGTGG CGGCGCTGGT CGGGCACAAG
GCCGACGTCT GGGGCCGCAA ACCGATCTTC GCCGTCGCGC TCGGCGTGCT GGCGCTGCGC
GGCGCGCTAT ACCCCCTGTC CGACAATCCG TATTGGCTGG TCGGCGTGCA ACTGCTCGAC
GGCGTCGGCG CCGGCATTTT CGGCGCGCTG TTTCCGCTGG TGGTGGCCGA CCTCACCCAC
GGCACCGGGC ATTTCAACAT CAGCCAGGGC GCGATCGCGA CGGCCGCAGG CCTCGGCGCC
GCGCTGTCGA CCGGCTTCGC CGGACTGATC GTGGTCAGCG CGGGCTACAG CGCCGCGTTC
CTGGCGCTTG CCGGCATCGC TGCTGCGGCG CTGGTGTTGT TCCTGGTGCT GATGCCGGAG
ACCCGACAGC AGCAATCGGC GGCACCACCT TCCGCAGCGC CGGAGGCGGT CTCATCCACC
GTCTAA
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| Protein sequence | MPPSPPQTLA RPLDALNFFL ADVRDGLGPY LAIYLLAVQN WNEASIGLVM SIAAAAGIAA
QTPAGALIDR STAKRALIIA AALVVTAASV VLPWLDSFVL VAATQALAAA AGAIFAPAVA
ALTLGIVGPR AFARRTGRNE AFNHAGNAVA AMLTGAFAYG FGPGVVFWLM AAMALASIFA
TLAIPAAAID DHVARGLGDD HERGAHHDQP SGFKVLLTCR PLLIFAGATV LFHFANAAML
PLVGQKLALV NKNLGTTLMS VCIVAAQLVM VPVAALVGHK ADVWGRKPIF AVALGVLALR
GALYPLSDNP YWLVGVQLLD GVGAGIFGAL FPLVVADLTH GTGHFNISQG AIATAAGLGA
ALSTGFAGLI VVSAGYSAAF LALAGIAAAA LVLFLVLMPE TRQQQSAAPP SAAPEAVSST
V
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