| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4996 |
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| Symbol | |
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| ID | 6412688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5377808 |
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| End bp | 5379718 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714879 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001993960 |
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| Protein GI | 192293355 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATCC ATGACAACAG CCGTTACCGC GAGGTTCATG CCCGCTCGCT GGCCGACCCG
GAGGGATTCT GGGGTGAGGT CGCGAAAGAC ATCGACTGGA TCACGCCGCC CACCAAGGTG
TTCGATCCCT CGCTCGGCCT GTATGGCCGC TGGTTTCCCG GCGCCAAGGT CAACACTTGC
TACAACGCCC TCGATCGCCA CGTCGCGAAC GGCCGCGCTG ATCAGCTCGC GCTGATCCAC
GACTCGCCGC TGACCGGCAC GGTGAGCAAG TACACTTACG CCGAGATGCT GCGCGAAGTG
CAGACGCTCG CCGCCATCAT GCAGGACTTC GGCGTTCAGA AGGGTGACCG CGTTATCCTT
TATATGCCGA TGGTACCGGA ATCGATGGTG GCGATGCTGG CCTGCGCCCG CATCGGCGCG
GTGCATTCGG TGGTGTTCGG CGGTTTTGCT GCCAAGGAGC TTGCCACCCG CATCGAAGAC
GCCAAGCCGA AGCTGATCCT GTCGGCGAGC TGCGGCATCG AGCCGGGACG CATCGTCAAG
TACAAGCCGC TGCTCGATGA AGCGATCGAA CTCGCCTCGG TGAAGCCGGA AGCTTGTATC
ATCCTCAAGC GGCCGCAGCA GGACTGCGAG CTGAAGGCGG GCCGCGATCA CGACTGGGCG
AGCTTGCGCG AGCAGGCGCT GGCGGCCGGC AAGAAGGCCG ACTGCGTCGC GGTCGATGCG
ACCGACCCGC TCTACATCCT CTACACCTCC GGCACGACCG GTAAGCCGAA GGGCGTGGTC
CGCGACAATG GCGGCCATCT GGTCGCGCTG AAGTGGACGA TGGAAAACCT CTACGGCATC
AAGCCCGGTG AGGTGTGGTG GTGCGCTTCC GATATCGGCT GGGTGGTCGG CCACAGCTAC
ATCATCTACG GCCCGCTGAT CCACGGCGCG ACTTCGATCA TGTATGAAGG CAAGCCGGTC
GGCACTCCTG ATGCCGGCGC GTTCTGGCGG GTGATTTCCG AGCACGGCGC GGTGGCGCTG
TTCACGGCGC CGACCGCGTT CCGCGCCATC CGCAAGGAAG ACCCGGATGG CAGCTTCATT
CGCAAATACG ACCTGTCGAA GTTGCGCACG CTGTTCCTGG CCGGCGAGCG CGCCGACCCG
CCGACGGTGG AGTGGGCCGA GCAGCAATTG CAGGTGCCGG TGATCGATCA CTGGTGGCAG
ACCGAAACCG GCTGGTGCAT CGCCGGCAAC CCGGTCGGCC TCGGCCTGTT GCCGGTGAAG
CACGGCTCGC CGACGGTGCC GATGCCCGGC TACAAGCTCG AAGTCGTCGA CGAGGGCGCC
AAGCCGGTGC CGGCCGGAAC GATGGGCTCG ATCGTCATTA AGCTGCCGCT GCCGCCCGGC
AATCTGCCGA CGCTGTGGCA GCAGGACGAG CGCTGCCGCG AGAGCTACTT CGCCGACTTC
CCCGGCTACT ACAAGACTTC CGACGCCGGC TATGTCGATG AAGACGGCTA TGTCTTCGTG
ATGGGCCGCA CCGACGACAT CATCAATGTC GCCGGCCACC GGCTGTCGAC TGGCGGCATG
GAAGAGATCC TCGCGTCGCA TCCGGACGTT GCCGAATGCG CCGTGCTCGG CATCAACGAT
CCGATCAAGG GCGAGGTGCC GTGCGGCCTG ATCGTGCTGA AGAGCGGTGT CACCCGCGAT
CCGGCCGAAA TCGAGAAGGA GATCGTCAAG CTGGTGCGCG ACAAGCTCGG CCCGGTTGCG
GCGTTCAAGC TCGCGATCAC CGTGCCGCGG TTGCCGAAGA CCCGCTCCGG CAAGATCCTG
CGCGGCACCA TCAAGAAGAT CGCCGACGGC GATACCTGGA CGATGCCGGC CACGATCGAA
GATCCGACCG CGCTCGACGA CATCTCCTCG GCGCTGAAGA GCCACAGCTG A
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| Protein sequence | MTIHDNSRYR EVHARSLADP EGFWGEVAKD IDWITPPTKV FDPSLGLYGR WFPGAKVNTC
YNALDRHVAN GRADQLALIH DSPLTGTVSK YTYAEMLREV QTLAAIMQDF GVQKGDRVIL
YMPMVPESMV AMLACARIGA VHSVVFGGFA AKELATRIED AKPKLILSAS CGIEPGRIVK
YKPLLDEAIE LASVKPEACI ILKRPQQDCE LKAGRDHDWA SLREQALAAG KKADCVAVDA
TDPLYILYTS GTTGKPKGVV RDNGGHLVAL KWTMENLYGI KPGEVWWCAS DIGWVVGHSY
IIYGPLIHGA TSIMYEGKPV GTPDAGAFWR VISEHGAVAL FTAPTAFRAI RKEDPDGSFI
RKYDLSKLRT LFLAGERADP PTVEWAEQQL QVPVIDHWWQ TETGWCIAGN PVGLGLLPVK
HGSPTVPMPG YKLEVVDEGA KPVPAGTMGS IVIKLPLPPG NLPTLWQQDE RCRESYFADF
PGYYKTSDAG YVDEDGYVFV MGRTDDIINV AGHRLSTGGM EEILASHPDV AECAVLGIND
PIKGEVPCGL IVLKSGVTRD PAEIEKEIVK LVRDKLGPVA AFKLAITVPR LPKTRSGKIL
RGTIKKIADG DTWTMPATIE DPTALDDISS ALKSHS
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