Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4994 |
Symbol | |
ID | 6412686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5376447 |
End bp | 5377136 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714877 |
Product | OmpW family protein |
Protein accession | YP_001993958 |
Protein GI | 192293353 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGT TTCTGACCGC AGTGTCGGCG CTGGCTTTGG CGGCGGCATT CAACCTCGTG TCGGCGAATG CCGACGCCGC CGATCTCGCC ACCCGTCCGA TCTACAAGGC GCCGGTTGTG GCGGAATCCA GCCCGTGGAT GATCCGCCTG CGCGCGCTGG GCGTGGTGCC CCGGGATTCG GGCTATGTCG ATCAGATCGC CGGCTCGTCG CTCAAGACCT CCGACGCGAT CGTCCCCGAG CTCGACATCA CCTACTTCTT CACCAAGAAC ATCGCCGCCG AATTGATCCT CGGCGTCACC CGCCACAGCG TCTCGGGTGC CGGCACCCTG ACCGGAATCG ACGTGGGCAA GGCCTGGCTG CTGCCGCCGA CCCTGACCCT GCAGTATCAC TTCACCGACT TCGGCGCTTT CAAGCCGTAT GTCGGCGCCG GTGTGAACTA CACCTTCTTC TTCAGCCAAA GCGCGGCCTG CTGCACCGTG ATCGACAGCC ACCTCAAGGA CGCGTTCGCG CCGGCGGTGC AGATCGGTTT CGACTACATG ATCGACCAGC ACTGGGGCAT CAACGTCGAC GTCAAGAAGC TGTGGCTGCG CCCCGAGTGG AGCGGCACTC TGGCGAACGG CACGCCGATC ACCGGCAAGG TCAATCTCGA TCCGTGGCTG ATCGGCACCG GCATCACCTA CCGGTTCTGA
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Protein sequence | MTKFLTAVSA LALAAAFNLV SANADAADLA TRPIYKAPVV AESSPWMIRL RALGVVPRDS GYVDQIAGSS LKTSDAIVPE LDITYFFTKN IAAELILGVT RHSVSGAGTL TGIDVGKAWL LPPTLTLQYH FTDFGAFKPY VGAGVNYTFF FSQSAACCTV IDSHLKDAFA PAVQIGFDYM IDQHWGINVD VKKLWLRPEW SGTLANGTPI TGKVNLDPWL IGTGITYRF
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