| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4989 |
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| Symbol | |
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| ID | 6412681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5370706 |
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| End bp | 5371668 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714872 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001993953 |
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| Protein GI | 192293348 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAGG ACAGTTTCAT TGAGGCTTTG CTGCCGGCGG GCTTTGGGCG CAACGAACGG
CTGGAGCGCA TTTCGGGCCT GATCGATTGG GGCCGTCTTG CCGTCCTGAT CCGCAAGGTG
CGGCCGGGCG AGACCGGGCG GCCGCCCTAC GAGCCGCTGG CCATGTTCAA GGCCTTGTTG
CTGCAACAGT GGTACGGACT GTCCGACCCC GGTCTCGAAG AGGCCCTGCT CGACCGGGTT
TCGTTTCGGC GCTTCTGCGG GTTCGCGCTG GACGCGCAGA CACCCGACGA GACGACGCTT
TGCCGGTTTC GCAATGCCTT GCAGCAGGCC GGCCTGGGAG ACGCCCTGTT TCAGGAGGTT
CTCCGGCAGC TCGAAGCGGC TGGATATGTC TTGAAGACAG GGACCTTGAT CGACGCAACC
CTGGTTCAGA GTTCAGGGCG AACGCCGGCG TCCGGATCGA CACCGCGCGA GATCGAGAGC
CGCTCGTCAC ACGATCCGGA AGCCAACTGG ACAAGGCAGG GCCCCAAGCG CCAGCTGTTC
TTCGGCTACA AGGCGCACAT CGCGATCGAT CAGGGATCGG GGCTGATCCG GGCCCGCAAA
CTGACCGGGG CGAAGACGTA TGAGAGCGAA GTCGCCGACG ATCTCGTCCT CGGCGACGAG
AAGGCGGTCT ATGCCGACAA GGCGTACGAG AAGCGTGCGC GTCGCCAAGC CCTCAAAGCC
CGCGGCATCA AGGATCGCAT CCAGCATCGT CGCAACAAGC ACCAGAAGGC GCTGCCGCGA
TGGCAGGCGG TGCGCAACAA GCTGATCGGC CATGTTCGGC AGGCGATCGA ACGCACCTTT
GCCCAACTGA AAGGCCGCTA CGGCTTCACC CGCATGCGCT ACGCAGGCAT CACCGCCAAC
GCATTCCACC TCGATCTGGT CTCGATCGCC TACAACCTGC GAACCGCAGC CGCCATCCGC
TGA
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| Protein sequence | MAQDSFIEAL LPAGFGRNER LERISGLIDW GRLAVLIRKV RPGETGRPPY EPLAMFKALL
LQQWYGLSDP GLEEALLDRV SFRRFCGFAL DAQTPDETTL CRFRNALQQA GLGDALFQEV
LRQLEAAGYV LKTGTLIDAT LVQSSGRTPA SGSTPREIES RSSHDPEANW TRQGPKRQLF
FGYKAHIAID QGSGLIRARK LTGAKTYESE VADDLVLGDE KAVYADKAYE KRARRQALKA
RGIKDRIQHR RNKHQKALPR WQAVRNKLIG HVRQAIERTF AQLKGRYGFT RMRYAGITAN
AFHLDLVSIA YNLRTAAAIR
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