Gene Rpal_4962 details

Gene Information

• Locus tag: Rpal_4962
• ID: 6412654
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 5342083
• End bp: 5342826
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642714845
• Product: hypothetical protein
• Protein accession: YP_001993926
• Protein GI: 192293321

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.640591
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAAGT TGCACGTTTC GATGCTGGCG CTCGCCCTCG GCGGCGCGCT GAGCTGCGCC 
GCCCCGATCG CGAGCCGCGC GGCCGATCAG CCGGTCAGCA AGCCGGCCGG CGCGATGAGC 
AAGGCTGCCG ACAAAGCGGT GGAGGCGACG AAGCCCGGCC CCTCGCCGGC TCCCGCCAAG 
ACCGCGAGCG CCGCCTCAAA GGTCTCGCCC GCGACCGTCG ATGGTTACAT CAAGGCGACG 
TTCGGCAAGG CACCGGAAGA CTGGCAGCAG CGCATCGTCC CCGACGAGAC GATGCAGGCC 
TGCAACAAGT ATCGCAACGA TGTGCCGCAC GAAGTCGGCG ATGCGATCAT GAAGCGCGAG 
ATCGCCAAGG TGGTGTATCC GGCCGACGGC AAATTCCTCG GCAATTGGAA GGACGGCGCC 
AAGATCGCCA ATAACGGCCA GGGCGGCCAG TTCTCCGACA AGCCGGAGAC GGTGCACGGC 
GGCAATTGCT ACGCCTGCCA TCAGATGGCG AAGTCGGAAG TGTCGTTCGG CACCCTCGGC 
CCGAGCCTCA CCCACTACGG CAAGGACCGC AACTACACCG AGGCCGAGAT CAAGCAGGCC 
TACACCAAGA TCTACAATTC GCAGGCGGTG GTGCCGTGCT CGAACATGCC GCGGTTCGGC 
ACCAACGGCT TCCTCACCGA ACAGCAGATC AAGGACGTGA TGGCATTCCT GTTCGATCCG 
GAATCGCCGG TGAACAAGGA ATAG 

 

Protein sequence

MTKLHVSMLA LALGGALSCA APIASRAADQ PVSKPAGAMS KAADKAVEAT KPGPSPAPAK 
TASAASKVSP ATVDGYIKAT FGKAPEDWQQ RIVPDETMQA CNKYRNDVPH EVGDAIMKRE 
IAKVVYPADG KFLGNWKDGA KIANNGQGGQ FSDKPETVHG GNCYACHQMA KSEVSFGTLG 
PSLTHYGKDR NYTEAEIKQA YTKIYNSQAV VPCSNMPRFG TNGFLTEQQI KDVMAFLFDP 
ESPVNKE