| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4961 |
|---|
| Symbol | |
|---|
| ID | 6412653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 5341248 |
|---|
| End bp | 5342069 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642714844 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001993925 |
|---|
| Protein GI | 192293320 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.379362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCCA TCACCGCTCT ATCGGCGGTG ATCGCCGTTG TGCTCTGCAC AATGCCGATC
GTCGCCAAGG CGCAGGACGC CAGCGAGAAG GAAATCGAGC GTTATCGCGA GATGATTTCC
GACCCGATGT CTAATCCCGG ATTCCTTGCG GTCGATCGCG GCGAACAGCT GTGGGCGGAG
AAGCGCGGCA CCAAGAACGT CTCGCTCGAA AGCTGCGATC TCGGTCTCGG CGCCGGCAAG
CTCGAAGGCG CGTTCGCGCA GCTGCCGCGC TACTTCAAGG ACGCCGACCG GGTGATGGAT
CTGGAGCAGC GCTTGCTGTG GTGCATGCAG AACATCCAGG GGCTCGACAC CAAGGACGTG
GTCGCACGCC GCTTCTCAGG TCCCGGCAAG CCGTCCGACA TGGAAGACTT GGTGGCGTTC
ATTGCCAACA AATCCACCGG CATGAAGATC GAGCCACAGC TCAGCCATCC CAAAGAACAG
GGAATGGCCG CGGTCGGCGA AGAGTTGTTC CACCGCCGCG GCGGCGTGAT GGATTTCTCG
TGTTCGACCT GCCACGGCGC CGAAGGCAAA CGCATCCGCC TGCAGGCCCT GCCCTACCTC
GCCGGCCCCA GCAAGGACGC GCAAGTGACG ATGGCGAGCT GGCCGACCTA CCGCGTGTCG
CAGAGCGCGC TGCGCACGTT CCAGCACCGG CTGTGGGACT GTTATCGCCA ACAGCGCTGG
CCGGCGCCGG AATACGGCTC CGACGGCATC ACCGCGCTGA CGCTGTATCT CAACAAGATC
GCGGCGGGCG GCGAACTCGC CGTGCCATCG ATCAAGCGCT GA
|
|---|
| Protein sequence | MRPITALSAV IAVVLCTMPI VAKAQDASEK EIERYREMIS DPMSNPGFLA VDRGEQLWAE
KRGTKNVSLE SCDLGLGAGK LEGAFAQLPR YFKDADRVMD LEQRLLWCMQ NIQGLDTKDV
VARRFSGPGK PSDMEDLVAF IANKSTGMKI EPQLSHPKEQ GMAAVGEELF HRRGGVMDFS
CSTCHGAEGK RIRLQALPYL AGPSKDAQVT MASWPTYRVS QSALRTFQHR LWDCYRQQRW
PAPEYGSDGI TALTLYLNKI AAGGELAVPS IKR
|
|---|
| |