Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4955 |
Symbol | |
ID | 6412647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5334961 |
End bp | 5336073 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642714838 |
Product | protein of unknown function DUF395 YeeE/YedE |
Protein accession | YP_001993919 |
Protein GI | 192293314 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.363072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATCTCG ACCTTCTCAT CGAGCGCTTC GGCGAAACCA CGCTGCTGAC CGCGGGCGGT CTGCTGGTGG GGCTGGTGTT CGGCGCGACC GCCGAACGCA GCAAGTTCTG CCTGCGCTCG GCGGTGATCG AGTTTTCCGA AAGCTCGTTC GGTCCGAAGC TCGCGGTGTG GCTGCTGACG TTCGCCGCCG CAGTCGCCGC CACACAGGTC GCGATCACCT CCGGCGTGCT CGATGTGTCC GAAGCGCGGC AGCTCGCCGC CACCGGCAGC CTGTCGGGTG CGATCATCGG CGGGCTGATG TTCGGTGCCG GCATGATCCT GTCGCGCGGC TGCGCCAGCC GGCTGTTGGT GTTGTCCGGC ACGGGGAACT TGCGTGCGCT GGTCACCGGT CTGATCCTCA CCATCGTGGC GCAGGCATCG CTGCGCGGCG TGCTGTCGCC GGTGCGTGAG TTCCTCACTT CGCTTTGGAC GCTGCCGGGT GGCGCGTCGC GCAACCTGCT CACCGTTGTT CATGCCGGTC CGGTGATCGG CGCCGCCTTC GGCTTCGCAT TGCTGGTGTG GGCGCTGTGG CTCGGCTGGC GCAACCGGAT CGGCATTATC ACCGGCATCG CCGCGATCGG GGTCGGTCTC GCTGTCACCG GCGGCTGGCT GGTCACCTAC ATTCTGGCGC AGCATTCGTT CGCGCCGACC CAGATCAAGA GCGTCAGCTT CACGGGGCCC TCGGCCGATA CGCTGATGGG GCTGATCAAC TCGCCCTCGG TGCCGCTCGG CTTCGACATC GGGCTGGTGC CCGGCGTGTT CGCCGGCTCG CTGCTCGCTG CGCTGATCGG CCGTGATTGG AAGCTGCAGG GGTTTCATGA CGGCCTCAGC ATGGGTCGCT ACGCGGCCGG TGCGTTCCTG ATGGGATTCG GCGGCATGCT GGCCGGCGGC TGCGCGGTCG GCGCCGGCGT CACCGGCGGC TCGATTTTCG CGGTGACCGC CTGGCTGGCG CTGGCTTCGA TGTGGCTCGG CGCGCTGGCG ACACATACGC TGCTCGACGC GAAAGCAGCA GCCAAAGCGG ACGCGGCTCC GGCGATCGAG CCGGCTCTTT CGGCGAAACA GACCGGCAAC TAA
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Protein sequence | MDLDLLIERF GETTLLTAGG LLVGLVFGAT AERSKFCLRS AVIEFSESSF GPKLAVWLLT FAAAVAATQV AITSGVLDVS EARQLAATGS LSGAIIGGLM FGAGMILSRG CASRLLVLSG TGNLRALVTG LILTIVAQAS LRGVLSPVRE FLTSLWTLPG GASRNLLTVV HAGPVIGAAF GFALLVWALW LGWRNRIGII TGIAAIGVGL AVTGGWLVTY ILAQHSFAPT QIKSVSFTGP SADTLMGLIN SPSVPLGFDI GLVPGVFAGS LLAALIGRDW KLQGFHDGLS MGRYAAGAFL MGFGGMLAGG CAVGAGVTGG SIFAVTAWLA LASMWLGALA THTLLDAKAA AKADAAPAIE PALSAKQTGN
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