Gene Rpal_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4955 
Symbol 
ID6412647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5334961 
End bp5336073 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content68% 
IMG OID642714838 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001993919 
Protein GI192293314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.363072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATCTCG ACCTTCTCAT CGAGCGCTTC GGCGAAACCA CGCTGCTGAC CGCGGGCGGT 
CTGCTGGTGG GGCTGGTGTT CGGCGCGACC GCCGAACGCA GCAAGTTCTG CCTGCGCTCG
GCGGTGATCG AGTTTTCCGA AAGCTCGTTC GGTCCGAAGC TCGCGGTGTG GCTGCTGACG
TTCGCCGCCG CAGTCGCCGC CACACAGGTC GCGATCACCT CCGGCGTGCT CGATGTGTCC
GAAGCGCGGC AGCTCGCCGC CACCGGCAGC CTGTCGGGTG CGATCATCGG CGGGCTGATG
TTCGGTGCCG GCATGATCCT GTCGCGCGGC TGCGCCAGCC GGCTGTTGGT GTTGTCCGGC
ACGGGGAACT TGCGTGCGCT GGTCACCGGT CTGATCCTCA CCATCGTGGC GCAGGCATCG
CTGCGCGGCG TGCTGTCGCC GGTGCGTGAG TTCCTCACTT CGCTTTGGAC GCTGCCGGGT
GGCGCGTCGC GCAACCTGCT CACCGTTGTT CATGCCGGTC CGGTGATCGG CGCCGCCTTC
GGCTTCGCAT TGCTGGTGTG GGCGCTGTGG CTCGGCTGGC GCAACCGGAT CGGCATTATC
ACCGGCATCG CCGCGATCGG GGTCGGTCTC GCTGTCACCG GCGGCTGGCT GGTCACCTAC
ATTCTGGCGC AGCATTCGTT CGCGCCGACC CAGATCAAGA GCGTCAGCTT CACGGGGCCC
TCGGCCGATA CGCTGATGGG GCTGATCAAC TCGCCCTCGG TGCCGCTCGG CTTCGACATC
GGGCTGGTGC CCGGCGTGTT CGCCGGCTCG CTGCTCGCTG CGCTGATCGG CCGTGATTGG
AAGCTGCAGG GGTTTCATGA CGGCCTCAGC ATGGGTCGCT ACGCGGCCGG TGCGTTCCTG
ATGGGATTCG GCGGCATGCT GGCCGGCGGC TGCGCGGTCG GCGCCGGCGT CACCGGCGGC
TCGATTTTCG CGGTGACCGC CTGGCTGGCG CTGGCTTCGA TGTGGCTCGG CGCGCTGGCG
ACACATACGC TGCTCGACGC GAAAGCAGCA GCCAAAGCGG ACGCGGCTCC GGCGATCGAG
CCGGCTCTTT CGGCGAAACA GACCGGCAAC TAA
 
Protein sequence
MDLDLLIERF GETTLLTAGG LLVGLVFGAT AERSKFCLRS AVIEFSESSF GPKLAVWLLT 
FAAAVAATQV AITSGVLDVS EARQLAATGS LSGAIIGGLM FGAGMILSRG CASRLLVLSG
TGNLRALVTG LILTIVAQAS LRGVLSPVRE FLTSLWTLPG GASRNLLTVV HAGPVIGAAF
GFALLVWALW LGWRNRIGII TGIAAIGVGL AVTGGWLVTY ILAQHSFAPT QIKSVSFTGP
SADTLMGLIN SPSVPLGFDI GLVPGVFAGS LLAALIGRDW KLQGFHDGLS MGRYAAGAFL
MGFGGMLAGG CAVGAGVTGG SIFAVTAWLA LASMWLGALA THTLLDAKAA AKADAAPAIE
PALSAKQTGN