| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4954 |
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| Symbol | |
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| ID | 6412646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5334502 |
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| End bp | 5334921 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714837 |
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| Product | Cytochrome c553-like protein |
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| Protein accession | YP_001993918 |
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| Protein GI | 192293313 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2863] Cytochrome c553 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.472283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGTGC TCGGCCGATA TTTTGATCGC TCGGATTGCG CCCGCCGGCC GGCGCTGCAG
ATGCGCGCCG AGTTCCGCAC ATTGCTCAGC GCCGCGGCGA TGCTGCTCGT CTGCGCGGTT
GCAGGCCCTG CGCTGGCCGG CGGCGACCGC GAGCTCGGCG AGTATCTGTC GAGCGAATGC
GTCACCTGCC ATCAGATCAG CGGACGGTTC GACGGCATCC CGTCGATCGT CGGTCGCGAC
GAGCCTGAGC TGGTCGCCGC GCTCACCGAG TATCGCGACA AGGTCCGCGA CAATCCGGTG
ATGCGGGCGA TCGCCGCCAA GTTCAACGAC GAAGAGATCG CGGCGCTCGC GAGCTACTTC
GGCAGCATCG AAAAACAACA AATCGAGCGC ACCGCAGACC GGAGTGGAGA CATCCGGTAG
|
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| Protein sequence | MAVLGRYFDR SDCARRPALQ MRAEFRTLLS AAAMLLVCAV AGPALAGGDR ELGEYLSSEC
VTCHQISGRF DGIPSIVGRD EPELVAALTE YRDKVRDNPV MRAIAAKFND EEIAALASYF
GSIEKQQIER TADRSGDIR
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