| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4944 |
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| Symbol | |
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| ID | 6412635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5326034 |
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| End bp | 5327494 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714826 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001993908 |
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| Protein GI | 192293303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.326969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACG CGGTCCGCGC CGGCGCGAAT GCCGGCGCAA CGAGCCTCGA TCCTGACAAT
TGGGACGCGC TGCGCGCCGA TGCGCATCGC ATGCTCGACG ATATGCTCGA CTACATCGCG
GACGTGCGCG ACCGTCCGGT GTGGCAGCCG ATCCCGCCCG CGGTGCGCGT CGGCTTCGCC
GAACCGCTGC CGCGCCAGGG CACGCCGCTA CCCGAGGTGT ATCGCCGTTT CACCGAAGAG
ATCGCGCCTT ACGCCACCGG CAACGTCCAT CCGGGCTTCA TGGGCTGGGT GCACGGCGGC
GGCACTGCGG TGGGGATGCT GGCCGAAATG CTGGCGGCCG GCCTCAATGC CAATTGCGGC
GGCCGCGATC ACATCGGCAT CGAGGTAGAA CGCCAGATCG TGCGCTGGCT GCGCGAACTG
TTCGGCTTTC CGCAAACCGC CAGCGGCGTG TTCGTCACCG GCTCGTCGAT GGCGAACTTC
ATGGCGCTGT TGGTCGCGCG CACCGCCGCG GTTGGCCCCC AGGTGCGCGA GGGCGGGCTG
CCGGGCGAAC GGCTCACTGC TTACGCTTCC GCAGCGGCGC ACGGCTGCGT GGTGCAGGCC
GCCGATCTGG CCGGGCTCGG CCGCGGCGCG CTGCGGCGGA TTCCATTCGG CAAGGATCAC
CGCATCGATA TCGACGCGCT GAAGCGGCGG ATCGCGGAAG ATCGCGCTGC CGGCTGCCAA
CCGTTCCTGG TGACCGGATC GGCCGGCACC GTCGATGTCG GCGCGATCGA CGATCTCGCC
GCACTCGCCG AGCTGTGCCG CGACGAAGGA CTGTGGTTTC ACGTCGACGG CGCCTATGGC
TCGCTCGGTA TGCTGTCGGA CGAAATCGCG CCGAAGCTGA AGGGCCTGTC GGAGGCGGAT
TCGATTGCGC TCGACTTCCA CAAATGGGGT CAGGTCAACT ACGACGCCGG CTTCCTGATC
GTGCGCGACG GCGAGCAGCA TCGTGATACG TTCGCGGCGC CGGCCGCTTA CTTGCGACGC
GAAACCCGCG GCCTCGCCGG CGGCTCGCCG TGGCCGTGCG ACTACGGCCC CGACCTGTCG
CGGGGTTTTC GCGCGCTGAA GACCTGGTTC ACGCTGAAGA CCTTCGGCGC CGACCGGATG
GGCGCGATGA TCGCCCAAAC CTGCAAGGTG GCGCGCTATC TCGAAGCCCG TGTCGAGCGC
GAGCCACAGC TCGAGATGCT GGCGCCGGTG ACGCTGAACA TCGTCTGCTT CCGTTATCGC
GCCGCACCGA ACGTGATGGA CTCGCTCAAC GCCGAGATCG TCGTCGACCT GCACGAATCC
GGCATCGCTG CGCCGTCCTC CACCACCATC GACGGCGCAT TGGCGATCCG CGCCGCGATC
GTCAACCACC GCACGACGTT TGCGGATGTC GACAAGATGG TGGATGCGGT GCTCAGGTTC
GGCAAAGCGA GAGTCGGATA G
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| Protein sequence | MSDAVRAGAN AGATSLDPDN WDALRADAHR MLDDMLDYIA DVRDRPVWQP IPPAVRVGFA
EPLPRQGTPL PEVYRRFTEE IAPYATGNVH PGFMGWVHGG GTAVGMLAEM LAAGLNANCG
GRDHIGIEVE RQIVRWLREL FGFPQTASGV FVTGSSMANF MALLVARTAA VGPQVREGGL
PGERLTAYAS AAAHGCVVQA ADLAGLGRGA LRRIPFGKDH RIDIDALKRR IAEDRAAGCQ
PFLVTGSAGT VDVGAIDDLA ALAELCRDEG LWFHVDGAYG SLGMLSDEIA PKLKGLSEAD
SIALDFHKWG QVNYDAGFLI VRDGEQHRDT FAAPAAYLRR ETRGLAGGSP WPCDYGPDLS
RGFRALKTWF TLKTFGADRM GAMIAQTCKV ARYLEARVER EPQLEMLAPV TLNIVCFRYR
AAPNVMDSLN AEIVVDLHES GIAAPSSTTI DGALAIRAAI VNHRTTFADV DKMVDAVLRF
GKARVG
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