Gene Rpal_4927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4927 
Symbol 
ID6412618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp5308393 
End bp5309490 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content66% 
IMG OID642714809 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_001993891 
Protein GI192293286 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGTC CCGTGCCGAA TCCCGGCATC CTCGATATTG CGCCCTACAC CCCCGGCAAG 
AGCCCGGTGG CCGAACCCGG CCGCAAGGTG TTCAAGCTCT CGGCCAACGA GACCCCGTTC 
GGCCCGTCGC CGCACGCGAT CGCGGCCTAT AAGAGCGCGG CGGATCATCT CGAGGACTAT 
CCGGAAGGCA CCTCGCGGAT CCTGCGCGAG GCGATCGGCA AGGCCTACGG CCTCGATCCC 
GACCGCATCA TCTGCGGCGC CGGCTCGGAC GAGATCCTCA ACCTGCTGGC GCACACCTAT 
CTGGCGCCCG GCGACGAGGC GATCTCGAGC CAGCACGGCT TTCTGGTGTA CCCGATCGCC 
ACGCTGGCGA ACGGCGCCAA GAACGTGGTC GCGCCCGAGA AGAACCTGAC CACCGACGTC 
GACGCCATGC TGGCGGCGGT GACGCCGAAC ACCAAGCTGG TGTGGCTCGC CAACCCGAAC 
AATCCGACCG GCACCTACAT CCCGTTCGAC GAAGTGAAAC GCCTCCGTGC AGGTCTGCCC 
AGCCATGTCG TGCTGGTGCT CGACGCCGCT TACGCCGACT ACGTGATGAA GAACGACTAC 
GAGCTCGGCA TCGAGCTGGT GTCGACCACC GAGAACACCG TGCTGACCCA CACCTTCTCC 
AAGGTGCACG GCCTCGCCGC ACTGCGGATC GGCTGGATGT TCGGCCCGGC CAACATCGTC 
GATGCGGTCA ACCGCATCCG CGGGCCGTTC AACGTCTCGG TGCCGGCGCA GCTCGCTGCG 
GTCGCGGCGA TCCAGGACAC CGGCCATGTC GAGCGCTCGC GCGCCCACAC CGACAAGTGG 
CGCAACACCC TCGCCGAAGA GCTGCCCAAG CTCGGGCTGA CGGTGACGCG GAGCGTGTGC 
AACTTCGTGC TGATCCACTT CCCGACCACC AAGGGCAAGA CCGCGGCAGA AGCCGACGCG 
TTCCTGACCC AGCGTGGCCT GGTGCTGCGT GCGCTCAACA ATTACGGCCT GCCGCATGCG 
CTGCGCATGA CCATCGGCAC CGACGAAGCC AACGCGCTGG TGCTGGAAAA CTTGCGCGAG 
TTCATGGGAC AGCCATGA
 
Protein sequence
MSRPVPNPGI LDIAPYTPGK SPVAEPGRKV FKLSANETPF GPSPHAIAAY KSAADHLEDY 
PEGTSRILRE AIGKAYGLDP DRIICGAGSD EILNLLAHTY LAPGDEAISS QHGFLVYPIA 
TLANGAKNVV APEKNLTTDV DAMLAAVTPN TKLVWLANPN NPTGTYIPFD EVKRLRAGLP 
SHVVLVLDAA YADYVMKNDY ELGIELVSTT ENTVLTHTFS KVHGLAALRI GWMFGPANIV 
DAVNRIRGPF NVSVPAQLAA VAAIQDTGHV ERSRAHTDKW RNTLAEELPK LGLTVTRSVC 
NFVLIHFPTT KGKTAAEADA FLTQRGLVLR ALNNYGLPHA LRMTIGTDEA NALVLENLRE 
FMGQP