| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4919 |
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| Symbol | |
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| ID | 6412610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5296343 |
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| End bp | 5298373 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714801 |
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| Product | Peptidase M23 |
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| Protein accession | YP_001993883 |
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| Protein GI | 192293278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCACGCG GGCGCAGCAC CGGGCGCGAG GTCGGCTATA TCGACCTTGG TCACGAGCCG
CCGCTTTCCG TCGACGGCTC CGAGGCCGCG GTCATCGACC GCCGACGCGT ATCGGTGCAG
TGGTTCAGCG GCACGATCCT CACCGGTCTC TGTGGTGCCG CACTGATCGG CGGCGCGGTA
TTCGCCTCGC TCGACGGTGA GACTACCTTC GCCAAAGCTC CCGAGCTGGT TCAGGCCGCA
CTGCGCGGCG CGTTCGGCGC CGACAAGAAC GCCGCCCTGC ATAAGAGCGA CCGGCTGCCG
CCTCCCAGTG AGGCCGCGCT CGCCCGCAGC GTGATCCGGG TCTCCACCGT GTCGCGGGTT
GGCCAACGCG ACGTGGTCCG CGTCCGTCCC TTCGTCAAGA TTTCCGGCAA CCTGTCGCTG
ACCACCAGCG ACCTGTCCGC CAAAATCCCC GCCTTCAATG CCCAGCGCAT GCTGAGCGAC
GTCGGCGGCC CCACACAGAC CGCCGAAGAC GCACAGAATC CGGATGCGGT TGAACCCGAC
GCCGAAGTCT CGTTCGTCAC TCGCGATCTC GGCACCGTGC TGCCGCGCGC CAAGATCGCC
GGCCAGATCC CGCCCGATGA AATCCTGATG CGCGTGCGCG ATGCCGCGCA CTGGAAGGGC
AATAGCGGCG TTCGCTACGC CAGCGCCGCC GGTGATTTCG GCGGCGACGT GAAGCTGGCT
TACGCACCCG AAGGTCCGTC CGCCGATCCA TATGCCGGCT TCGAAACCCG GATCGTGCCG
GAAAACGTGA CGCTGCTGCC GAAGACCAAA GAGCAGGTCA CCGGCGGCAA CCCGACCGGC
GAACGGACCC ACATCGTCAA GAAGGGCGAC AGCGTCGTCT CGGTGCTGCG CGACCAGGGT
GCCGCCGAAG AAGATGCTCG TGCGGTCGCC GCTGCGCTCG GCGCGCGCGG CCGCGACGGC
GGCCTGAAGG AAGGCCAGAA ACTACGCATC CTGATGGAAT CGTCAGGCCC CGGCAAAGCG
CCCCAACCGT TCCGCGTCAT CGTCGCCAAC GACTCCGCGG TCGAGGCGGT CGCAGCGCTC
TCCGATCTCG GCCGCTACGT CGCCGTCGAC GTGCAGAGTC TCAACACCGT CAGCGAAACC
GCCGACAACA GCGACGAGGA CGAGGACGAC GGCACCGGTG TCCGGCTGTA TCAGTCGATC
TACGAGACCG CGCTCCGCAA CAAGGTGCCG CAGTCGGTGA TCGACGACAT GATCCGGATC
TACTCCTACG ACGTCGACTT CCAGCGCAAA GTCCAGGCCG GCGACTCGTT CGAAGTGTTC
TACGCCGGCG ACGACGAAAC CACCGCCACC GTCGAAAAGA ACGACGTGCT GTTCGCCTCC
CTCACCGTCG GCGGCGAAAC CAAGAAATAC TATCGCTTCC AGACCCCGGA CGACGCGGCG
GTCGATTTCT ACGACGAGAC CGGCAAGAGC GCGAAGAAGT TCCTGGTCCG CAAGCCGGTC
AATCAGGCGA TCATGCGCTC CGGCTTCGGC GCCCGCCGCC ACCCGATCCT CGGCTACGTG
AAGATGCACA CCGGCGTCGA CTGGTCGACG CCCTACGGCA CGCCGATCTT CGCGTCGGGC
AACGGCGTAG TCGAGAAGGC CGGCTGGGAA GGCGGCTACG GCAAGTACAT CCGCATCAAG
CACGCCAACG GCTACGAGAC CGCCTACGGC CATATGTCGG CATTCGCCAA GGGCATGGAG
CCCGGCAAGC GCGTTCGCCA GGGCCAGGTG ATCGGCTTCG TCGGCTCCAC CGGCCTGTCG
ACCGGCGCGC ACGTCCACTA CGAAATCATC GTCAACGGCC GCTTCGTCGA TCCGATGCGC
GTGCGTCTGC CGCGCGGCCG CTCGCTCGAA GGCCCGCTGC TCGCGGGCTT CGAGAAGGAG
CGCGACCGGC TCGACGGAAT GATGACCGGC CGCGGTGGCG GACGTCTGGC GGAAGATCTC
ACCGCCTCGG CCCCGGTGCG GACGTCGTCC AACGCGCAGG CGCGGCGCTA A
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| Protein sequence | MSRGRSTGRE VGYIDLGHEP PLSVDGSEAA VIDRRRVSVQ WFSGTILTGL CGAALIGGAV
FASLDGETTF AKAPELVQAA LRGAFGADKN AALHKSDRLP PPSEAALARS VIRVSTVSRV
GQRDVVRVRP FVKISGNLSL TTSDLSAKIP AFNAQRMLSD VGGPTQTAED AQNPDAVEPD
AEVSFVTRDL GTVLPRAKIA GQIPPDEILM RVRDAAHWKG NSGVRYASAA GDFGGDVKLA
YAPEGPSADP YAGFETRIVP ENVTLLPKTK EQVTGGNPTG ERTHIVKKGD SVVSVLRDQG
AAEEDARAVA AALGARGRDG GLKEGQKLRI LMESSGPGKA PQPFRVIVAN DSAVEAVAAL
SDLGRYVAVD VQSLNTVSET ADNSDEDEDD GTGVRLYQSI YETALRNKVP QSVIDDMIRI
YSYDVDFQRK VQAGDSFEVF YAGDDETTAT VEKNDVLFAS LTVGGETKKY YRFQTPDDAA
VDFYDETGKS AKKFLVRKPV NQAIMRSGFG ARRHPILGYV KMHTGVDWST PYGTPIFASG
NGVVEKAGWE GGYGKYIRIK HANGYETAYG HMSAFAKGME PGKRVRQGQV IGFVGSTGLS
TGAHVHYEII VNGRFVDPMR VRLPRGRSLE GPLLAGFEKE RDRLDGMMTG RGGGRLAEDL
TASAPVRTSS NAQARR
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