| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4902 |
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| Symbol | |
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| ID | 6412588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5271100 |
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| End bp | 5272206 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714779 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001993866 |
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| Protein GI | 192293261 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCGA TTTCTGCTTT CGACGGGTTC TTCAGGCTGT TAGCGGGCGC GCTGCTTGCC
GTTGCGATCC TTGGCTTGGC GGGCTGCGAC GGCAAGGACG CCAAACAGGA GCTCTCCAAG
CGCCCGGTCC TGGTCACCGC GGTGCATTAC GCCCCGCAGG CGCCCGAGCG CAGCTTCGTC
GGCACGATCA AGCCCCGCAC TGAAACCGAC GTCGGCTTCC GGGTCACCGG CAAGGTCGCC
AAGCGCCTCG TCGAAGTCGG TGACACCGTT GAGGTCGGCC AGAAGCTGGC GCTGCTCGAT
CAGACCGATC TGAAGCTGCA GGCCGAGCAG GCCGAGGCCG AACACAGCGC CGCCAAGGGC
GTGCTGGCGC AGGCGATCGC GTCTGAAAAC CGCGCCAAGG AGCTGCGCGC CAAGGGCTGG
GCGACCGAAG CCCAGATGGA TCAGGCGCGC GCCACCGCGG ACGAGGCCCG CGCCCGCTTT
GCCCGCGCCG AGCGCTCGGT CGAGCTGACC CGCAACTCGC TGTCCTACGC AACGCTCGAA
GCCGACAGTC ACGGTGTCGT GGCATCCGCG CTGGTCGAAC CTGGGCAGGT GGTCGCGGCC
GGTCAGGCCG CCTTCCGGCT CGCCCGCATC GGCGAGAAGG AAGCCGTGGT GGCGATCCCC
GAAACGCTGA TCACCCGCGC CACCAAGGGG CTGGCCGACG TCACGCTGTG GTCCGAACCC
GGCCGGCATT ACGTCGCCAA GCTGCGCGAG GTGGCGCCGC TCGCCGATCC CGCGACCCGT
ACGTTCCTGG CCAAGTTCTC GCTGCCGGAT GCCGACGACC GGGTCGTGCT CGGCATGACT
GCGACGCTGA CGCTGACCGA TCCCGACAAG GTCCGCGTCG CCCGGGTGCC GCTGTCGGCG
CTGTTCAATC AGGGCGGCCA GCCGTCGCTT TACGTCGTCC ACGGCAGCGG CGAGGTGAAG
CTGAAGCGGG TCGCCGTGAA GGCCTACGAG ACCGACGACG TGGTGATTAC CGAGGGCGTC
GACGAAGGCG ATCAGATCGT CACGCTCGGC GTGCAGAAAC TCGATCCTGC CGAGAAGGTG
CGGGTGGTGT CGGCTCTGAC GTTCTGA
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| Protein sequence | MRAISAFDGF FRLLAGALLA VAILGLAGCD GKDAKQELSK RPVLVTAVHY APQAPERSFV
GTIKPRTETD VGFRVTGKVA KRLVEVGDTV EVGQKLALLD QTDLKLQAEQ AEAEHSAAKG
VLAQAIASEN RAKELRAKGW ATEAQMDQAR ATADEARARF ARAERSVELT RNSLSYATLE
ADSHGVVASA LVEPGQVVAA GQAAFRLARI GEKEAVVAIP ETLITRATKG LADVTLWSEP
GRHYVAKLRE VAPLADPATR TFLAKFSLPD ADDRVVLGMT ATLTLTDPDK VRVARVPLSA
LFNQGGQPSL YVVHGSGEVK LKRVAVKAYE TDDVVITEGV DEGDQIVTLG VQKLDPAEKV
RVVSALTF
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