| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4901 |
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| Symbol | |
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| ID | 6412587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5267941 |
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| End bp | 5271078 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714778 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001993865 |
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| Protein GI | 192293260 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.626163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCA ATCTGTCGGC CTGGGCGGTC CGACATCCGG CGCTGATCCT GTTTCTGATC
TGCGCGCTCG GCTTCACCGG CATCTATTCG TATCAGCGGC TCGGCCGCGG CGAAGATCCG
TCGTTCACCG TCAAGGTCGC GGTGGTATCG GCGATCTGGC CGGGCGCCAC CGCCAAGGAG
ATGCAGGAAC AGGTCGCCGA CCCGATCGAG AAGAAGCTGC AGGAGCTTCC TTACTTCGAA
AAGGTGCAGA CCTATTCGAA GGCGTCGTTC ACTGCGATGC AGGTGACGTT CCGCGACTCG
ACGCCGCCGT CCGAAGTGCC GCACCTGTTC TATCTGCTGC GCAAGAAGCT GTGGGATGTC
GCGCCGCAAT TGCCGAGCAA CCTGATCGGC CCGTCGATCA ATGATGAATA CGGCGACGTC
GATTCGATCC TCTACATGAT GACCGGCGAC GGCGCGAGCT ACGCGCAGCT CAAGAAGGCC
GCCGAAGGAA TGCGGCAGCG GTTGCTCAAG GTCGCGGGCG TCTCCAAGGT CAACATCTAC
GGTACCCAGG ACGAGAAGAT CTATGTCGAG TTCTCGCACG CCAAGCTGGC GACGCTCGGC
CTGACGCCGC AGGCGATCTT CGACTCGCTC GCCAAGCAGA ACGCGGTGGT GCCGGCCGGC
ACGGTCGAGA CTTCGTCGCA GCGCGTACCG CTGCGCGTCA CCGGCGCGCT CGATGGTGCG
CAGGCGGTGG CGGAGACGCC GGTCGAAAGC GGCGGCCGGG TATTTCGGCT CGGTGACGTT
GCCGAGATCC GCCACGGTTA TGTCGACCCG ACCGATTACC AGGTGAGGCA GAAGGGCAAG
CCGGCGATCG GCATCGGCAT CGTCACCGCC AAGGGCGCCA ACATCCTGCA GCTCGGCGAG
CAGGTCGGTG TGGCGACCAC GTCGTTCATG GCCGACGTGC CGCAGGGCAT CGAGATCGAG
CAGATCGCCG ACCAGCCCGA AGTGGTGAAG CATGCGGTCG GCGAGTTCAT GCGCTCGTTC
GTCGAGGCGC TGGTGATCGT GCTGTTCGTG TCGTTCCTGG CGCTCGGCTG GCGCACCGGC
ATCGTGGTGG CGCTGTCGGT GCCGCTGGTG CTGGCCATCG TGTTCATCGT CATGAACGTG
ATGGCGATCG ATCTGCACCG GATCACGCTC GGCGCCTTGA TCATCGCGCT CGGCCTTCTG
GTCGACGACG CCATCATCGC GGTGGAGATG ATGGTGGTGA AGATGGAGCA GGGCTGGGAT
CGTGCCAAGG CGGCATCGTT CGCCTGGGAG TCGACGGCGT TTCCGATGCT CACCGGCACG
CTGGTGACTG CCGCCGGCTT CCTGCCGATC GGCTTTGCCA ATTCGGGCGT CGGCGAATAT
GCCGGTGGCA TCTTCTGGAT CGTGGCGATC GCGCTGATCG CCTCGTGGTT CGTGGCGGTG
ATCTTCACGC CCTATATCGG CGTCAAGCTG CTGCCGGACT TCGCCGGCAA GAAGGGCCAC
AATCCGGACG AGGTGTATCA CACCCGGATC TATCGGGCGC TCCGCGCGGC GGTCACTTGG
TGCGTGCGCT GGCGCGGCAC GGTGGTGACG GCGACGGTCG GCATCTTCAT CGCCGCGGTG
ATCGGCTTCG GCCACGTCCA GCAGCAGTTC TTCCCGCTGT CGGAACGGCC TGAACTGTTC
CTGCAGCTCC GCCTGCCCGA AGGCACCGCT TTCGACGTCA CCATGAAGTC GGTGAAGGAG
GCCGAGACGC TGCTGAAGGA CGACGGCGAC ATCGCGACCT ACACGGCCTA TGTCGGCAAG
GGCTCGCCGC GGTTCTGGCT CGGCCTCAAT CCGCAGCTTC CGACCGAATC CTTCGCCGAG
ATCGTGGTCG TCGCCAAGGA CGTCGCGGCG CGCGAGCGGA TCAAGGCGCG GATCGAACAG
GCCGCGCATA GCGGCCGGCT CGCGGCGGCG CGGGTGCGTG TCGACCGCTT CAACTTCGGC
CCGCCGGTCG GCTTCCCGGT GCAGTTCCGG GTGATCGGCC CGGACACCGC CAAGGTCCGG
GAGATCGCCT ATCAGGTCCG GGACGTCGTG AAGAAGAACG CGAACGTCGT CGATCCGCAT
CTCGATTGGA ACGAGCAGTC GCCGTATCTC AAATTGGTGG TCGACCAGTC GCGTGCCCGC
GCACTCGGCC TGACGCCGCA GGACGTCTCG CAGGCGCTGG CGATGCTGAT CTCCGGTGCG
CAAGTCACCA CGGTACGTGA CGGGGTGGAA AAGATCGGCG TGGTCGCGCG CGCGGTGCCG
AACGAGCGGC TCGATCTTGC CCGGATTGGC GAACTCACCA TCACCGCTCG CAACGGCATG
GCGGTGCCGC TGTCGCAGGT TGCCAAGGTC GAGTACGCGC ATGAGGAGCC GATCCTGTGG
CGGCGCAATC GCGACATGGC GATCACCGTG CGCGGCGACG TCGTCGACGG CGTGCAGGCG
CCGGACGTCA CCAACGCGAT CTGGCCGCAG CTCGAGAACA TCCGCGCCAA TCTGCAGCCG
GCCTACCGGA TCGAGACCGG CGGCGCGATC GAGGAGTCGA CCAAAGGCAA TGCCTCGATC
TTCATCCTGT TTCCGGTGAT GGTGATTGCG ATGCTGGCGC TGCTGATGAT CCAGCTGCAA
AGCTTCCCGC GGCTGCTGCT GGTGTTTCTC ACCGCGCCGC TCGGCATCAT CGGCGCCTCG
CTCGGGCTCA ACGTCGCCTC GGCGCCGTTC GGCTTCGTGG CGCTGCTCGG CCTGATCGCG
CTCGCCGGCA TGATCATGCG GAATGCGGTG ATCCTGGTCG ACCAGATCGA GAGCGATGTC
GCGCACGGCT CGACCCGGCG CGAGGCGATC GTCGAGGCGA CGGTGCGCCG GGCGCGGCCG
GTGGTGCTGA CGGCGCTGGC GGCGGTCCTG GCGATGATCC CGCTGTCGCG CTCGGCGTTC
TGGGGGCCGA TGGCGATCAC CATCATGGGC GGCCTGTTCG TCGCCACCTT CCTGACGCTG
TTCTATCTGC CGGGGCTGTA CGCGCTGTGG TTCCGCAAGA CTCTAGACGA ACGGGGGAAG
GTGGCCGAGC CGGATCTTGC GCCGCAACAC GGCGGCGGTG GCCCGAACGC CTTTCCGCTT
GCCGACGCGG CGGAATAA
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| Protein sequence | MRFNLSAWAV RHPALILFLI CALGFTGIYS YQRLGRGEDP SFTVKVAVVS AIWPGATAKE
MQEQVADPIE KKLQELPYFE KVQTYSKASF TAMQVTFRDS TPPSEVPHLF YLLRKKLWDV
APQLPSNLIG PSINDEYGDV DSILYMMTGD GASYAQLKKA AEGMRQRLLK VAGVSKVNIY
GTQDEKIYVE FSHAKLATLG LTPQAIFDSL AKQNAVVPAG TVETSSQRVP LRVTGALDGA
QAVAETPVES GGRVFRLGDV AEIRHGYVDP TDYQVRQKGK PAIGIGIVTA KGANILQLGE
QVGVATTSFM ADVPQGIEIE QIADQPEVVK HAVGEFMRSF VEALVIVLFV SFLALGWRTG
IVVALSVPLV LAIVFIVMNV MAIDLHRITL GALIIALGLL VDDAIIAVEM MVVKMEQGWD
RAKAASFAWE STAFPMLTGT LVTAAGFLPI GFANSGVGEY AGGIFWIVAI ALIASWFVAV
IFTPYIGVKL LPDFAGKKGH NPDEVYHTRI YRALRAAVTW CVRWRGTVVT ATVGIFIAAV
IGFGHVQQQF FPLSERPELF LQLRLPEGTA FDVTMKSVKE AETLLKDDGD IATYTAYVGK
GSPRFWLGLN PQLPTESFAE IVVVAKDVAA RERIKARIEQ AAHSGRLAAA RVRVDRFNFG
PPVGFPVQFR VIGPDTAKVR EIAYQVRDVV KKNANVVDPH LDWNEQSPYL KLVVDQSRAR
ALGLTPQDVS QALAMLISGA QVTTVRDGVE KIGVVARAVP NERLDLARIG ELTITARNGM
AVPLSQVAKV EYAHEEPILW RRNRDMAITV RGDVVDGVQA PDVTNAIWPQ LENIRANLQP
AYRIETGGAI EESTKGNASI FILFPVMVIA MLALLMIQLQ SFPRLLLVFL TAPLGIIGAS
LGLNVASAPF GFVALLGLIA LAGMIMRNAV ILVDQIESDV AHGSTRREAI VEATVRRARP
VVLTALAAVL AMIPLSRSAF WGPMAITIMG GLFVATFLTL FYLPGLYALW FRKTLDERGK
VAEPDLAPQH GGGGPNAFPL ADAAE
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