Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4896 |
Symbol | |
ID | 6412582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5264062 |
End bp | 5264859 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642714773 |
Product | transcriptional regulator, DeoR family |
Protein accession | YP_001993860 |
Protein GI | 192293255 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.302168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGCTC TGACCCATCG CCAGTCTGAA ATCCTCAACC TCGCCCGCGC TTCGGGCCGG GTGATGGTCG AGGATCTGGT GCGGCGCTTC GAAGTGTCGG CACAGACCAT CCGCAAGGAT CTCAACGATC TATGCGACCA GCGCTCGCTG ACGCGGATCC ACGGCGGCGC GATCATCGCC TCCGGCGTCG CCAACCTCGC TTATGAGGCG CGCCGCTTCG TCGCCGCCGA AGAAAAGAAG GCGATCGGCG CAGCTGCAGC GGCGCAGATT CCCAACGGCT GCTCGCTGTT CATCAACATC GGCACCACCA CCGAGGAGGT CGCCAGCGCG CTGTCGGCGC ATCAGGATCT GTTGGTGATC ACCAACAATC TCAACGTCGC GATGCTGCTG TACCGGCATC CGCGGATCGA GGTGATCGTC GCCGGCGGCA CCGTGCGGCG TGCCGATGGT GCGGTGATCG GCTCCACCGC CACCAGCCTG ATCGGCCAGT TCAAGGTCGA TTACGCGATC ATCGGCGCTT CGGCGATCGA CGAAGAGGGC GCGCTGCTCG ATTTCGATTA TCGCGAAGTC CAGGCCTCGC AGGCGATCAT CGCCAATGCC CGCAGCGTGA TGCTGGTGGC GGATTCGACC AAGCTGGAGC GCAACGCGCC GGTGCGCATC GCCCATCTCA GCCAGATCCA GACCTTCGTC ACCGACCGGG CGCTGCCGCC CTCGCTGCAG GCGATCTGCG ATACGAATGG TATCGAGGTA ATCGAAGCCT GCGCGGCGAA ACCCGATCTC GACGAGTCCG CGGCCTAA
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Protein sequence | MTALTHRQSE ILNLARASGR VMVEDLVRRF EVSAQTIRKD LNDLCDQRSL TRIHGGAIIA SGVANLAYEA RRFVAAEEKK AIGAAAAAQI PNGCSLFINI GTTTEEVASA LSAHQDLLVI TNNLNVAMLL YRHPRIEVIV AGGTVRRADG AVIGSTATSL IGQFKVDYAI IGASAIDEEG ALLDFDYREV QASQAIIANA RSVMLVADST KLERNAPVRI AHLSQIQTFV TDRALPPSLQ AICDTNGIEV IEACAAKPDL DESAA
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