| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4895 |
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| Symbol | glpD |
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| ID | 6412581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5262331 |
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| End bp | 5263866 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714772 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001993859 |
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| Protein GI | 192293254 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.481949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTACG ACCTCGCGAT CATCGGGGGC GGGATCAACG GCTGCGGCAT CGCGCGCGAT
GCAGCGGGCC GCGGACATTC CGTGTTCCTG TGCGAGATGA ACGACCTCGC CAGCGGCACC
TCGTCGTGGT CGACCAAGCT GATCCATGGC GGCCTGCGCT ATCTCGAATA TTTCGAGTTT
CGCTTGGTGC GCGAGGCGCT GATCGAGCGC GAGCGGCTGT GGCAGATCGC GCCGCATATC
ATCGGGCCTC TGCGTTTCGT GCTGCCGCAT CACGACGGCC TGCGTCCGGC CTGGCGGCTG
CGGCTCGGCT TGTTCATGTA CGATTATCTC GGCGGCCGGA AGCTGCTGCC GCCGACCCGC
TCGGTCGATC TGGCGCATGA CGAAGTCGGC AAGCCGCTGA TTCCCGGTCG CTACACCAAG
GGCTTCGAAT ACTCCGATTG CTTTGTCGAT GACGCGCGGC TGGTGGTGCT CACCGCACGC
GACGCGGCCG AGCGCGGCGC CGAAATCCGC ACCCGGACTC GCGCAGTCCA GGTCAGCCAG
CAGGGCGGCA TCTGGCAGGT GACGCTGGAA GATGTTGGTA GCGGCGCGCG CAGCACGATC
CAGGCGCGGG CATTGGTCAA CGCCGCCGGC CCCTGGGTCG AAGGCGTGCT CCGCTCCGGC
GCCGGGGTCG ATGCCCGCTA CAAAGTGCGG CTGGTGCAGG GCTCGCACAT CGTCACCCGT
AAGCTCTACG ACCACGACCG CGCCTACATC TTCCAGAACG CCGACGGCCG CATCGTGTTC
GCGATTCCCT ATCAGGGCGA CTTCACCCTG ATCGGCACCA CCGACCGCGA CTATCACGGC
GATCCGTCGC AGGTGAAGGC GACGCCGGAA GAGATTGATT ATCTCTGTAA GGCGGTGAGC
GGCTATTTCG CCAAGCCCGT GACACCGGCC GATGTGGTGT GGACCTTCTC GGGCGTGCGG
CCGCTGTATG ACGACGGCGC CAGCGAAGCC AAGGCGGCGA CCCGCGACTA CGTGTTCGAG
CTCGACACCC CGGGCGGCGC GCCGCTGCTG TCGATCTATG GTGGCAAGAT CACCACCTAT
CGCCGGCTCG CCGAAGAGGC GCTGGAGAAG CTGTCCTCCT ACCTGAAGGG CGGAACGGCC
AAGCAGGGCT GGACCGCGCA TCAGCCGCTG CCGGGCGGCG ATTTCCCGGT CGACGGCGGT
CCGGCGCTGA TCGGCGACCT GCTGCGCGAG TATCCGTTCC TGGCCTCCGC GCATGCCTCG
CGCCTGGTGC ACGCCTACGG CACCCGGGCG CGTGACGTGC TCGGCTCGGC CAAGTCGGCG
GCCGATCTCG GCCGCGACTT CGGCGCCACA TTGACGGAGG CCGAGGTCCG CTATCTGATG
AGCCGCGAAT GGGCCTGCAG CGCGGACGAC ATCGTCTGGC GGCGATCCAA GCTCGGTTTG
CGGCTGACGC CGGCCGCGGT CGCCGCGCTC GACGAATGGG TCATCGTCCA CCGCGCCGCC
GAGAAGCCCC AGCAGCAAGC GGGAGGCCGG GCATGA
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| Protein sequence | MVYDLAIIGG GINGCGIARD AAGRGHSVFL CEMNDLASGT SSWSTKLIHG GLRYLEYFEF
RLVREALIER ERLWQIAPHI IGPLRFVLPH HDGLRPAWRL RLGLFMYDYL GGRKLLPPTR
SVDLAHDEVG KPLIPGRYTK GFEYSDCFVD DARLVVLTAR DAAERGAEIR TRTRAVQVSQ
QGGIWQVTLE DVGSGARSTI QARALVNAAG PWVEGVLRSG AGVDARYKVR LVQGSHIVTR
KLYDHDRAYI FQNADGRIVF AIPYQGDFTL IGTTDRDYHG DPSQVKATPE EIDYLCKAVS
GYFAKPVTPA DVVWTFSGVR PLYDDGASEA KAATRDYVFE LDTPGGAPLL SIYGGKITTY
RRLAEEALEK LSSYLKGGTA KQGWTAHQPL PGGDFPVDGG PALIGDLLRE YPFLASAHAS
RLVHAYGTRA RDVLGSAKSA ADLGRDFGAT LTEAEVRYLM SREWACSADD IVWRRSKLGL
RLTPAAVAAL DEWVIVHRAA EKPQQQAGGR A
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