| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4894 |
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| Symbol | |
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| ID | 6412580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5261255 |
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| End bp | 5262334 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714771 |
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| Product | ABC transporter related |
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| Protein accession | YP_001993858 |
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| Protein GI | 192293253 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.332035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCA GCCTGGAGAA TGTCACCAGG GTGCTGGACG GCGTTCCGGC GATCCGCAAC
GTATCGCTGA CGCTGGAACG CGGTACGCTC AGCGTGCTGC TCGGACCAAC CCTGTCGGGC
AAGACCTCGA TCATGCGGCT GCTCGCCGGC CTCGACAAGC CGACCACCGG TCGTGTGCTG
GTCGACGGCA AGGACGTCAC CGGCGCCGAT GTACGCACCC GCTCGGTGGC GATGGTGTAT
CAGCAGTTCA TCAACTACCC GTCGCTGACC GTGTACGAGA ACATCGCCTC GCCGCTGCGC
GTGCAGCGCA AGTCGCGCGC CGAGATCGAG CAGCGCGTCC AGGAGGCAGC CAAGCTGCTC
AAGCTCGAGC CGTATCTGCA GCGCACGCCG CTGCAGCTTT CCGGCGGCCA GCAGCAGCGC
ACCGCGATCG CCCGCGCGCT GGTCAAGGGT GCCGATCTGG TGTTGCTCGA CGAGCCGCTC
GCCAACCTCG ACTACAAACT GCGCGAGGAA CTGCGCACCG AGCTGCCGAA GATCTTCGAG
GCCTCCGGCG CGATCTTCGT TTACGCCACC ACCGAGCCTT CCGAAGCGCT GCTGCTCGGC
GGCCGCACCA TCTGCATGTG GGAAGGTCAG GCGCTACAGG TCGGGCCGAC CCCGCAGGTG
TATCGCAAGC CCGACACCAT GCGGGTGGCG CAGGTGTTCT CCGATCCGCC GCTCAACATC
GTCGGCGCCG AGAAGAAGGC CGGCACCGTG CATTACTCCG GCGGCGTCAC CGCGCCCGCG
ACTGGTGTAT TCGCGAGCCT TTCCGATGGC GCCTATCGCG TCGGCTTCCG TGCGCATCAG
ATCGAGGTGA AGAGCGCCGA TCCGGATCGC CACGCGTTCC GAGCCACCGT CGCGGTGACC
GAGATCACCG GCTCTGAGAG CTTCGTGCAT CTGAAGCGCG GCGACGATTA CTGGGTCGCG
GTGCTGCACG GCATCCACGA GTTCGAGCCG GGCCAGACGC TCGACGCCAT CCTCGACCCC
GCCAATCTGT TCGTGTTCGA CGCGGCTGAT CGCCTCGTCG CCGCGCCGAA GCCGATCTGA
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| Protein sequence | MSVSLENVTR VLDGVPAIRN VSLTLERGTL SVLLGPTLSG KTSIMRLLAG LDKPTTGRVL
VDGKDVTGAD VRTRSVAMVY QQFINYPSLT VYENIASPLR VQRKSRAEIE QRVQEAAKLL
KLEPYLQRTP LQLSGGQQQR TAIARALVKG ADLVLLDEPL ANLDYKLREE LRTELPKIFE
ASGAIFVYAT TEPSEALLLG GRTICMWEGQ ALQVGPTPQV YRKPDTMRVA QVFSDPPLNI
VGAEKKAGTV HYSGGVTAPA TGVFASLSDG AYRVGFRAHQ IEVKSADPDR HAFRATVAVT
EITGSESFVH LKRGDDYWVA VLHGIHEFEP GQTLDAILDP ANLFVFDAAD RLVAAPKPI
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