| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4882 |
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| Symbol | |
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| ID | 6412568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5248413 |
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| End bp | 5249597 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714759 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001993846 |
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| Protein GI | 192293241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCATC TGTTGATTAT GACAGCCACG GCTGTCGCGC TGGCTACCAC CGCGGTCCAT
GCCGCCGACG ACCTCAAGAT CGCGCTGATC TACGGCAAGA CCGGCCCGCT CGAAGCCTAC
GCCAAGCAGA CCGAGACCGG CCTGATGATG GGGCTGGAAT ACGCCACCAA GGGCACGATG
ACGCTCGACG GCCGCAAGAT TGTGGTGATC ACCAAGGACG ATCAGAGCAA GCCGGACCTC
TCCAAAGCTG CACTCGCCGA AGCCTATCAG GATGACGGCG CCGACATCGC GATCGGCACC
TCGTCGTCGG CTGCGGCGCT CGCCGATCTG CCGGTCGCCG AAGAGAACAA GAAGATCCTG
ATCGTCGAGC CCGCCGTGGC CGACCAGATC ACCGGCGAGA AGTGGAACCG CTACATCTTC
CGCACCGGCC GCAACTCCTC GCAGGACGCG ATCTCCAACG CGGTCGCGAT CGGCAAGCAG
GGCGTCACCA TCGCAACGCT GGCGCAGGAC TACGCGTTCG GCCGCGACGG CGTCGCCGCC
TTCAAGGAGG CGCTCGCCAA GACCGGCGCG ACGCTCGCCG CCGAGGAATA TGTGCCGACC
ACCACCACCG ACTTCACCGC AGTCGGCCAG CGGCTGTTCG ATGCGCTGAA GGACAAGCCG
GGCAAGAAAA TCATCTGGGT GATCTGGGCC GGCGGCGGCG ATCCGCTGAC CAAGCTGCAG
GACATGGACC CGAAGCGCTA CGGCATCGAG CTGTCGACCG GCGGCAACAT CCTGCCGGCG
CTCGCCGCTT ATAAGCGCCT GCCGGGCATG GAAGGCGCGA CCTATTACTA CTACGATATC
CCCAAGAACC CGATCAACGA GTGGCTGGTC ACCGAGCACC AGAAGCGCTT CAACGCCCCG
CCGGACTTCT TCACCGCCGG CGGCTTCTCG GCCGCGATGG CCGTTGTCAC CGCCGTGCAG
AAGGCGAAGT CGACCGACAC CGAGAAGCTG ATCGCCGCGA TGGAGGGTAT GGAGTTCGAC
ACCCCGAAGG GCAAGATGGT GTTCCGCAAG GAGGACCATC AGGCGCTGCA GAGCATGTAT
CACTTCAAGG TCAAGGTCGA TCCGGCAGTC GCCTGGGCGG TGCTGGAGCC GGTGCGCGAA
TTGAAGATCG AGGAGATGAA CATCCCGATC AAGAATAAGA AGTAG
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| Protein sequence | MRHLLIMTAT AVALATTAVH AADDLKIALI YGKTGPLEAY AKQTETGLMM GLEYATKGTM
TLDGRKIVVI TKDDQSKPDL SKAALAEAYQ DDGADIAIGT SSSAAALADL PVAEENKKIL
IVEPAVADQI TGEKWNRYIF RTGRNSSQDA ISNAVAIGKQ GVTIATLAQD YAFGRDGVAA
FKEALAKTGA TLAAEEYVPT TTTDFTAVGQ RLFDALKDKP GKKIIWVIWA GGGDPLTKLQ
DMDPKRYGIE LSTGGNILPA LAAYKRLPGM EGATYYYYDI PKNPINEWLV TEHQKRFNAP
PDFFTAGGFS AAMAVVTAVQ KAKSTDTEKL IAAMEGMEFD TPKGKMVFRK EDHQALQSMY
HFKVKVDPAV AWAVLEPVRE LKIEEMNIPI KNKK
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