| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4880 |
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| Symbol | |
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| ID | 6412566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5246048 |
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| End bp | 5246947 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642714757 |
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| Product | hypothetical protein |
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| Protein accession | YP_001993844 |
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| Protein GI | 192293239 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3440] Predicted restriction endonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTTG GAGTTTTCAT CCATCGCTCG GACTCAATAT ACGACGACAG TCCGGCCGAG
CGCTATCAAT TCCCGAGCCA GTATTTGGGC CGCGCGCGGA ATTTCGTCGG TGACTGGATC
GTCTATTACG AACCGCGCAA GGTTCATTCA ACACGTGGCT ACTTCGCAAT TGCGAGAGTA
CAGCAGATCA TTCCGGACCC AAGTGCACCT GGAATGTATC TGGCGATCAT CGAGCCCTCG
AGCTATCTGG ACTTCGCAAA GCCCGTTCCG TTCTCAGATG CGAACGGGGT AGTCGAACTT
GGTGTCCTCA ATGAACAAGG ACGCATTTCG GGAAGGGCTC AGTCGGCTGT CCGCCCGATC
TCGCCCGAGG ACTTCGATCG GATCGTTCGG CGGGGCTTGG ATGACGAAGG ACCTGAGCTA
CTGCCTAGGA TCGACGCGAC TGAGAGCTTC CAATTCGCCG AACCCCAGAC TCCCTTCCAG
GCTGAATCAT CACGTCAAAG ATTGGAATTC CTGTCGTCAA GAATCGTCAG AGACCGGGCC
TTCCGAAGGA TCATTCTAGG CGCATATGAT GAGCGATGTG CGGTCACAGG CCTAAGGCTC
ATCAACGGTG GCGGGAGGGC AGAAGTCGAT GCGGCACATA TTCGTCCTGT TGAGGCGAAT
GGGCCGGATG TCGTGAATAA CGGCATCGCA CTCTCTGGGA CGGCGCATTG GATGTTTGAC
CGAGGGCTCA TTACGCTGTC TGATGATCTG GCGATTTTGA TCTCAAGACA GGTCAACGAC
GTGGAGGGCG TTCGCGGCCT TCTCAACAAA ACAGGCTACG CGATCGCTCC CAAGCATCAG
TATCAGCGCC CTCACCCGCA CTTTCTGAAG TGGCATCGCG AGCACCGTTT CAAACAGTGA
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| Protein sequence | MGFGVFIHRS DSIYDDSPAE RYQFPSQYLG RARNFVGDWI VYYEPRKVHS TRGYFAIARV
QQIIPDPSAP GMYLAIIEPS SYLDFAKPVP FSDANGVVEL GVLNEQGRIS GRAQSAVRPI
SPEDFDRIVR RGLDDEGPEL LPRIDATESF QFAEPQTPFQ AESSRQRLEF LSSRIVRDRA
FRRIILGAYD ERCAVTGLRL INGGGRAEVD AAHIRPVEAN GPDVVNNGIA LSGTAHWMFD
RGLITLSDDL AILISRQVND VEGVRGLLNK TGYAIAPKHQ YQRPHPHFLK WHREHRFKQ
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