| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4858 |
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| Symbol | |
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| ID | 6412544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5221207 |
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| End bp | 5222598 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714735 |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_001993822 |
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| Protein GI | 192293217 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT CCGCCGTCTT GCGCCGTCGC CCGCTCGCCG CGCTCGCCGT CTTTGCCGCC
GTGGTGGTGG GAACGCCTGC TGCGGCGCAG ACCGTCACTG CCGCGCCGCC CGCGACCTTC
ACGCTGCAGA ACGGCCTTCG GGTGGTGGTG ATTCCGGATC ACCGCACGCC GGTGGTGACC
CAGATGATCT GGTACAAGGT CGGCTCCGCC GATGAGACGC CCGGCAAGTC GGGGCTGGCG
CATTTCCTCG AACATCTGAT GTTCAAGGGC ACCGAGAAGC ATCCGGCCGG CGAGTTCTCG
CAGACCGTGC TGAAGATCGG TGGCAACGAG AACGCGTTCA CCTCCTATGA TTTCACCGGC
TACTTCCAAC GCGTGCCGCG GTCCCACCTC GAACAGATGA TGACGTTCGA GGCCGATCGC
ATGACCGGCC TGGTGTTGAA GGACGAGAAC GTGCTGCCGG AGCGCGACGT CGTGCTCGAA
GAGTACAACA TGCGGGTTGC TAACGATCCG GATGCGCGGC TGACCGAGCA GATCATGGCG
GCGCTGTACC TCAATCATCC CTACGGCCGG CCGGTGATCG GCTGGCATCA GGAAATCGCC
AAGCTCGATC GCGAGGATGC CCTGGCGTTC TATCGCCGGT TCTACGCGCC CAACAACGCC
ACGCTGGTGA TCGCCGGCGA TATCGAGGCC GATGAGGTTC GCCCGCTCGC CGAGCGGATC
TATGGAACGA TCCCGGCGCA GCCGGCGATC CCGCCGCAGC GCATCCGCCC GCAGGAGCCG
ACGCCGGCGG GGCCGCGCAC GGTGACGCTC GCCGATCCTC GCGTCGAACA ACCGGCGGTG
CGGCGCTATT ACCTGGTACC GTCGGCCCAC ACCGGCGCCA AGGGCGACAG CGCCGCGCTG
GAAGTGCTGG CGCAACTGCT CGGCCATGGC AGCAATTCGT ATCTGTACCG CGCGCTGGTG
ATCGACAATC CACTGGCGAT CACGGTGGGC GCCAACTACC AGGGCAATGC GCTCGACGAC
AGCTACTTCA TCGTCGCCGG CACGCCGAAG CCGGGTGTCG ATTTTGCCGC GATCGAGAAG
AAGATCGACG AAGTGATCGC CGACGTCGTC GCCAACCCGG TTCGCTCCGA GGACCTGGAG
CGGGTCAAGA CCCAGCTGAT CGCCGCCGCG GTCTATGCGC AGGACAATCA GGCGACTCTG
GCGCGCTGGT ACGGCCAGGC GCTGACCACC GGTCTCAGCG TCCAGGACGT GCAGAGCTGG
CCCGACCGCA TCCGCGCCGT TACGTCCGAT GATGTGCGTG CCGCCGCCAA GCAATGGCTC
GACCGCAACC GCTCGGCGAC CGGCTATCTG GTCACCGGAC CCGCCGCCAA GCAGGAGGAG
AAGCGCTCGT GA
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| Protein sequence | MTASAVLRRR PLAALAVFAA VVVGTPAAAQ TVTAAPPATF TLQNGLRVVV IPDHRTPVVT
QMIWYKVGSA DETPGKSGLA HFLEHLMFKG TEKHPAGEFS QTVLKIGGNE NAFTSYDFTG
YFQRVPRSHL EQMMTFEADR MTGLVLKDEN VLPERDVVLE EYNMRVANDP DARLTEQIMA
ALYLNHPYGR PVIGWHQEIA KLDREDALAF YRRFYAPNNA TLVIAGDIEA DEVRPLAERI
YGTIPAQPAI PPQRIRPQEP TPAGPRTVTL ADPRVEQPAV RRYYLVPSAH TGAKGDSAAL
EVLAQLLGHG SNSYLYRALV IDNPLAITVG ANYQGNALDD SYFIVAGTPK PGVDFAAIEK
KIDEVIADVV ANPVRSEDLE RVKTQLIAAA VYAQDNQATL ARWYGQALTT GLSVQDVQSW
PDRIRAVTSD DVRAAAKQWL DRNRSATGYL VTGPAAKQEE KRS
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