Gene Rpal_4856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4856 
Symbol 
ID6412542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5219207 
End bp5219626 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content68% 
IMG OID642714733 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001993820 
Protein GI192293215 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGGA TCAGCCGCAC CCTCGTGATC GAGGACGACG ACATCGAGAT CAGCTTCATC 
CGCGCCTCCG GGCCGGGCGG GCAGAACGTC AACAAGCTGT CGACCGCGGT GCAGCTCCGG
TTCGACACTG CCAAGATCGC GCTGCCGGAG GACGCCGCCG CGCGCCTCGT CGGTCTTGCC
GGCCAGCGCA TGACCAAGGA CGGCGTCATC GTCATCCGCG CCGACCGCTA TCGCACCCAG
GAACGCAACA AGGCCGACGC GCTGGAGCGG CTTGAAGAGC TGCTGAAAGC CTCGCTGGTC
CGCCCGATCC CGCGCCGAGC CACCCGGCCG ACGCTTGGCT CCAAGAAACG CCGCCTCGAA
GGCAAGAAGC GCCGCGGTGA CATCAAGGCC GGGCGGAGCG GCAAGAGCTT CGATGATTGA
 
Protein sequence
MLRISRTLVI EDDDIEISFI RASGPGGQNV NKLSTAVQLR FDTAKIALPE DAAARLVGLA 
GQRMTKDGVI VIRADRYRTQ ERNKADALER LEELLKASLV RPIPRRATRP TLGSKKRRLE
GKKRRGDIKA GRSGKSFDD