| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4855 |
|---|
| Symbol | mutL |
|---|
| ID | 6412541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5217185 |
|---|
| End bp | 5218972 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642714732 |
|---|
| Product | DNA mismatch repair protein |
|---|
| Protein accession | YP_001993819 |
|---|
| Protein GI | 192293214 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
|---|
| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTTC GCCAACTTCC CGAAATCATC GTCAACCGCA TCGCCGCCGG CGAGGTGGTG
GAGCGGCCGG CGAGCGTGGT GAAGGAGCTG GTCGAGAACG CGATCGACGC AGGTAGCAGC
CGGATCGACA TCTTCTCGGA CGGCGGAGGC CGGCGAAAGA TCGTGATCGC CGACGACGGC
TCCGGCATGA CCGCGGCCGA TCTCGCGCTC GCGGTCGATC GCCACGCCAC CTCGAAGCTC
GACGACGAGG ATCTGCTGCA GATCCGCACC CTCGGCTTTC GCGGCGAGGC GCTGCCGTCG
ATCGGCGCGG TGGCGAAGCT GTCGATCACC ACGCGCCATG CCAGCGAGCC GCACGCCTGG
ACGCTCCGCG TCGAGGGCGG CGACAAGACT CCGATCGCTC CGGCGGCGCT GAGCCAGGGC
ACCCGCGTCG AAGTCGCCGA CCTGTTCTTT GCCACGCCGG CGCGGCTGAA GTTCCTCAAG
ACCGACCGCA CCGAGGCCGA GGCGATCCGC GAGGTGGTGC GGCGCCTGGC GATGGCGCGG
CCGGACATCG CCTTCACGCT GGCCGGCGAG GAGCGCGCGC CGGTGACCTG GGCGGCGGCG
TTGCCCGGCG CGCCGGGGCA ATTGATCCGG CTCGGCGACA TCCTCGGTGC AGACTTCCGC
GCCAATGCGA TCGAAGTCCG TGCCGAGCGC GAGGGCGTGG TGGTCGAAGG CTTCGCGGCG
TCGCCGGCGC TGACCAAGGC CAATGCGCTC GGCCAGTATC TGTTCGTGAA CGGCCGCCCG
GTGCGCGACA AGCTGATCCT GGGGGCGGTG CGCGCCGCCT ATTCGGATTA CTTGCCGCGC
GACCGCCATC CGGTGGTGGC GCTGTTCGTC ACGCTGGATA GCCGCGAGGT CGACGCCAAC
GTGCATCCGG CCAAGACCGA GGTGCGGTTC CGCAATGCGG GGCTTGTCCG TGCGCTGATC
GTGCACGCGC TCAAGGACGG CTTGGCGCGC GAGGGCCGTC GCACCGCCGC CAACAGCGCC
GGCAGCGTGA TCTCGACATT CCGGCCCGCC TCGATGCCGC CGGCGAATTG GGACTGGCGA
GCTTCGCCGT CCTATCCGGT CGGCGGCAGC GCGGCGCCGT CGTTCGCCGA GCGCGCGCAG
GCCGCGTTCG ATGTCGGCGC GCCGAGCGCG GATATTCGTC CGACCGAGGT CACGCCGGAT
CTGCTCGACC GTCCGCTCGG CGCGGCGCGC ACCCAGATCC ACGAGACCTA CATCGTGTCG
CAGACCCGCG ATGGACTCAT CGTTGTGGAT CAGCACGCCG CGCATGAGCG CATTGTCTAT
GAGCGGCTGA AGGCCTCGCT CGAAGCCAAC GGCGTGCAGC GCCAGATCCT GCTGATCCCC
GACATCGTCG AGATGGACGA GGCGACGGTG GAGCGTCTGG TCGCGCGCGG CGAGGAGCTG
GCGAAGTTCG GCCTGGTGAT CGAGAGCTTC GGCCCGGGCG CGGTGGCGGT GCGTGAGACG
CCGTCGCTGC TCGGCAAGAC CGATGCCGGC GGTCTGCTCC GCGACCTCGC CGAACACATG
GCCGAATGGG ACGAAGCGCT GCCGCTGGAG CGCCGCCTGA TGCACGTCGC CGCCACCATG
GCCTGCCACG GTTCGGTGCG GGCCGGGCGC GTCCTCAAGC CCGAGGAAAT GAACGCGCTG
CTGCGCGAGA TGGAAGCGAC GCCGAACTCC GGCCAATGCA ACCACGGCCG CCCGACCTAT
GTCGAACTGA CGCTGACCGA TATCGAGAAG CTGTTCGGGC GGAGGTAG
|
|---|
| Protein sequence | MPVRQLPEII VNRIAAGEVV ERPASVVKEL VENAIDAGSS RIDIFSDGGG RRKIVIADDG
SGMTAADLAL AVDRHATSKL DDEDLLQIRT LGFRGEALPS IGAVAKLSIT TRHASEPHAW
TLRVEGGDKT PIAPAALSQG TRVEVADLFF ATPARLKFLK TDRTEAEAIR EVVRRLAMAR
PDIAFTLAGE ERAPVTWAAA LPGAPGQLIR LGDILGADFR ANAIEVRAER EGVVVEGFAA
SPALTKANAL GQYLFVNGRP VRDKLILGAV RAAYSDYLPR DRHPVVALFV TLDSREVDAN
VHPAKTEVRF RNAGLVRALI VHALKDGLAR EGRRTAANSA GSVISTFRPA SMPPANWDWR
ASPSYPVGGS AAPSFAERAQ AAFDVGAPSA DIRPTEVTPD LLDRPLGAAR TQIHETYIVS
QTRDGLIVVD QHAAHERIVY ERLKASLEAN GVQRQILLIP DIVEMDEATV ERLVARGEEL
AKFGLVIESF GPGAVAVRET PSLLGKTDAG GLLRDLAEHM AEWDEALPLE RRLMHVAATM
ACHGSVRAGR VLKPEEMNAL LREMEATPNS GQCNHGRPTY VELTLTDIEK LFGRR
|
|---|
| |