| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4854 |
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| Symbol | |
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| ID | 6412540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5215946 |
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| End bp | 5217058 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714731 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001993818 |
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| Protein GI | 192293213 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTTT CGTTCGACAA GATGGACGGC TCGCTCTGGC TGGATTTCGA CGTGCAGCCG
ACCGCCAGCC CGACGCCGGA CGCCGATCGC GCCGCCAAGC TGGAAAATCC GGGCTTCGGC
CGGGTGTTTA CCGACCACAT GGCCGTGGTC CGCTATGACC AGACCAATGG CTGGCACGCT
GCGCGCGTCG AGGCTCGTGC CAATTTCCCG CTGCACACCG CGACCGCCGT GCTGCACTAC
GCGCAGGAAA TCTTCGAGGG CCTGAAGGCT TACAAGCGCG AGGACGGCGG CGTGAACCTG
TTCCGCCCCG ACGCCAACGC CAAGCGCTTC CGCGACTCGG CCGACCGCAT GGCGATGGCG
CCGCTTCCGG AAGCGGTGTT CATCGAAGCG GTCGAGCAGG TCGTCAAGAT CGACCGCAAC
TGGATTCCGG GCGGCGAAGG CAGCCTGTAT CTGCGCCCGT TCATGATCGC CAGCGAAGTG
TTCCTCGGCG TCAAGCCGTC GGCGGAATAC ATCTTCGCGG TGATCGCCTC GCCGGTCGGC
TCGTACTTCA AGGGCGGCCC GGCCCCGGTC TCGATCTGGG TGTCGGAAAC CTACACCCGC
GCGGCGATCG GCGGCACCGG CGGCGTCAAA TGCGGCGGCA ACTACGCGGC CAGCTTGCGC
GCCCAGGCCG AGGCGATCGA GCGCGGCTGC GACCAGGTGG TGTTTCTCGA TGCGCTCGAG
CGCCGCTACG TCGAAGAACT CGGCGGCATG AACGTGTTCT TCGTGTTCGA CGACGGCTCG
CTGTCGACGC CGCCGCTCGG CACCATCCTG CCCGGCATCA CCCGCGACTC GATCATCACC
CTGGCGCGCG CCGCCGGCCG CACCGTGCGC GAGGAGCCGT ACACCATCGA GCAGTGGCGC
GCCGATGCGG CGAGCGGCAA GCTGAAGGAA GCGTTCGCCT GCGGCACCGC CGCGGTGATC
TCGCCGATCG GCAAGGTGTG CTCGAACCAC GGCGACTTCA CCATCAACGG CGGCCAGGCC
GGCGAGGTGG CGATGGGCCT GCGCAAGCAG CTCGTCGACA TCCAATACGG CCGCGCCGAG
GACAAGCAGG GCTGGATCAA GAAGGTGTTC TGA
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| Protein sequence | MGVSFDKMDG SLWLDFDVQP TASPTPDADR AAKLENPGFG RVFTDHMAVV RYDQTNGWHA
ARVEARANFP LHTATAVLHY AQEIFEGLKA YKREDGGVNL FRPDANAKRF RDSADRMAMA
PLPEAVFIEA VEQVVKIDRN WIPGGEGSLY LRPFMIASEV FLGVKPSAEY IFAVIASPVG
SYFKGGPAPV SIWVSETYTR AAIGGTGGVK CGGNYAASLR AQAEAIERGC DQVVFLDALE
RRYVEELGGM NVFFVFDDGS LSTPPLGTIL PGITRDSIIT LARAAGRTVR EEPYTIEQWR
ADAASGKLKE AFACGTAAVI SPIGKVCSNH GDFTINGGQA GEVAMGLRKQ LVDIQYGRAE
DKQGWIKKVF
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