| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4852 |
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| Symbol | |
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| ID | 6412538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5214393 |
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| End bp | 5215115 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642714729 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001993816 |
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| Protein GI | 192293211 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCAGC TCGCAACACT GGCGAAGAAA CCGATCCGCC CCGCCGACGA TGCGCCGCAT
CTGCTGCTGG TCGACGACGA TCGCCGGATC CGCGATCTGC TGTCGCGGTT TCTCGCCTCC
GAAGGCTATC GCGTGACCAC CGCGCAGAGC GTGCGCGACG CCCGCGCCAA GCTCGCCGGG
CTCGATTTCG ATCTGTTGAT CCTCGACGTG ATGATGCCGG GCGAGACCGG CTTCGATCTC
GCCCGCTCGA TCCGCGAAAC CTCCGACGTG CCGATCGTGA TGCTCACCGC CCGGCACGAG
GCGGAGAGCC GGATCGAGGG GCTGCAGATC GGCGCTGACG ACTACGTCGC CAAGCCGTTC
GAGCCGCGCG AACTGCTGCT GCGGATCGGC AATATCCTCA AGCGCACCGC GCCGGCGCCG
GCCGCCAAGG CCGAGACGGT GGCGTTCGGG CCTTACGTGT TTCACATCGA GCGCGGCGAA
CTGCGCCAGG GTGACGAGAT CGTCCACCTG ACCGACCGCG AGCGCGACAT GCTGCGGATG
CTGGCGGCGG CGCCCGGCGA GACGGTGCCG CGCGGCGATC TCAGCGGCGC CGGCAATGCC
AATGAGCGCG CGGTCGACGT CCAGATCAAC CGCCTCCGCC GCAAGATCGA ACGCGACCCG
GCCAACCCGC TGTTCCTGCA AGCCGTCCGC GGCATCGGCT ATCGCCTGGT GGCGGCGCCG
TAG
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| Protein sequence | MIQLATLAKK PIRPADDAPH LLLVDDDRRI RDLLSRFLAS EGYRVTTAQS VRDARAKLAG
LDFDLLILDV MMPGETGFDL ARSIRETSDV PIVMLTARHE AESRIEGLQI GADDYVAKPF
EPRELLLRIG NILKRTAPAP AAKAETVAFG PYVFHIERGE LRQGDEIVHL TDRERDMLRM
LAAAPGETVP RGDLSGAGNA NERAVDVQIN RLRRKIERDP ANPLFLQAVR GIGYRLVAAP
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